KEGG   Bartonella quintana RM-11: RM11_0225Help
Entry
RM11_0225         CDS       T02294                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bqr  Bartonella quintana RM-11
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bqr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RM11_0225
Enzymes [BR:bqr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RM11_0225
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RM11_0225
DNA repair and recombination proteins [BR:bqr03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RM11_0225
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Position
297751..298626
Genome map
AA seq 291 aa AA seqDB search
MPELPEVETVRRGLEPFITGAKIISITLNRRDLRFPFPEAFSERLVGRTIMELGRRAKYL
LFHLSQNETILSHLGMSGSWRIEDDLLRKTYSAAGKFVKHDHFLMDIQAKDSKVYHLTYN
DVRRFGFMLLLDTNRLYEHPLLKKLGLEPLSNEFSGRYLQEAFVNKKISLKGVLLDQSII
AGLGNIYVCEALWRSRLSPQRGAFTLALKTVRAREFADSLAQNIRNVIAEAISFGGSTLR
DYIRTDGSLGYFQHSFSVYGREGKECFRCGTPITRISQSGRSSFYCSQCQK
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactccctgaagtagaaacagttcgtcgtggacttgagccgtttataactggt
gcgaagattatatcaatcacgcttaatcgtagagatttacgatttcctttccctgaggcc
ttttctgagaggcttgtgggcagaacaattatggaacttggtcgacgcgcgaaatatttg
ttattccatctttcgcaaaatgaaacaattttgagccatttaggaatgtccggatcatgg
cgtatagaggatgatcttttaagaaaaacatattctgctgcagggaaatttgttaagcat
gatcactttctcatggatattcaagcaaaggatagcaaagtttatcatcttacttataat
gatgttcgtcgttttgggtttatgcttttactagatacaaacaggctttatgagcatccg
cttttaaagaaactagggctcgaacctctgagcaatgagttttctggtcgttatttacaa
gaagcttttgttaataaaaaaatatctcttaaaggagtcttacttgatcagtctattatt
gcaggtcttgggaatatttatgtttgcgaagcgctttggcgtagtcgcttgtctccacaa
cgtggagcattcaccttagcattgaagactgtacgtgcacgcgaatttgcagattcttta
gcgcagaatatacgcaatgtgattgctgaagcaatttcttttggtggatctactttacgg
gattatattcgtacagatggctcacttggttattttcaacactctttttcagtttatgga
cgagaaggcaaagaatgctttcgatgtggaacacctattacacgtatttcacagtctgga
cgttcaagcttttactgttcacagtgtcaaaaataa
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