KEGG   Bacillus velezensis YAU B9601-Y2: MUS_3688
Entry
MUS_3688          CDS       T02108                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bqy  Bacillus velezensis YAU B9601-Y2
Pathway
bqy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bqy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MUS_3688 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bqy03019]
    MUS_3688 (rnr)
   03016 Transfer RNA biogenesis [BR:bqy03016]
    MUS_3688 (rnr)
Enzymes [BR:bqy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     MUS_3688 (rnr)
Messenger RNA biogenesis [BR:bqy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MUS_3688 (rnr)
Transfer RNA biogenesis [BR:bqy03016]
 Prokaryotic type
  tRNA degradation factors
   MUS_3688 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 OB_Dis3 TFIIE_beta CSN8_PSD8_EIF3K
Other DBs
NCBI-ProteinID: AFJ63555
UniProt: I2CA81
Position
complement(3482587..3484920)
AA seq 777 aa
MEKEAFMDRLLAFMKEEAYKPLTVQELEEMLNITEADEFKELVKALVALEETGQIVRTRS
NRYGLPEKMNLVKGKISAHAKGFAFLLPEDTSLSDVFIPPNELNTAMNGDIVMVRLNSQS
SGSRQEGTVIRILERSIDRVVGTYTETKSFGFVIPDDKKITSDIFIPKHANNGAAEGHKV
VVKLTSYPEGRMNAEGEIVEILGHKNDPGIDILSIIHKHGLPGDFPAEVMEQATSTPDSI
DEKDIKDRRDLRDQVIVTIDGADAKDLDDAVTVTKLDNGSYKLGVHIADVSHYVTENSPI
DKEALERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINQQGQVTEHEIFQ
SVIKTTERMTYSDVNRILTEDDAELKERYEPLVPMFKDMERLAEILRAKRMDRGAVDFDF
KEAKVLVDEEGAVKDVVIRERSVAEKLIEEFMLVANETVAEHFHWMNVPFIYRIHEEPNA
EKLQKFLEFVTTFGYIVKGKAGDIHPRALQSILDEVRDRPEETVISTVMLRSMKQAKYDP
QSLGHFGLATEFYTHFTSPIRRYPDLIVHRLIRTYLINGQSDEATQEKWAERLPEIADHT
STMERRAVDAERETDDLKKAEYMLDKIGEEFDGMISSVTNFGMFVELPNTIEGLVHVSFM
TDDYYRFDEQHFAMIGERTGNVYRIGDEITVKVVDVNKDERNIDFEIVGMKGTRRPRETT
GDRRKRGRPARKRVLNSNTPASPPKSEEKGEWFTKPKKKKKKRGFQNAPKQKRKKKK
NT seq 2334 nt   +upstreamnt  +downstreamnt
atggaaaaagaagcgtttatggaccgtcttctcgcgtttatgaaggaagaggcgtacaag
ccccttaccgttcaggaactcgaggagatgctgaacatcacggaagcagatgaatttaaa
gagctggtaaaagcgctggtggcgctcgaggagacgggacagattgtccgcaccagaagc
aaccgctacgggcttccggaaaaaatgaatttagtaaaaggaaaaatttccgcgcatgca
aagggattcgcgtttctattgccggaggatacctctttaagcgacgtgtttattccgccg
aatgagctgaatacggccatgaacggcgatatcgtcatggtgcggctcaattcccagtca
agcggatcgagacaggaaggcacggtcatccgcatcctggaaagaagcatcgaccgcgtc
gtgggcacatacacagaaacgaaaagcttcggctttgtcatcccggatgataagaaaatc
acgagtgatatttttattccgaaacatgccaataacggcgctgcggaaggccataaagtc
gtcgtcaaactgacaagctaccctgaaggcagaatgaacgccgaaggagaaatcgttgaa
atactcggccataaaaatgatccggggatcgatattttatcaattatccataagcacggc
ctgccgggggactttccggctgaagtgatggagcaggcaacaagcacgcccgattccatc
gatgaaaaagacatcaaagaccgccgtgatctccgcgatcaggtcattgtcaccattgac
ggcgcggatgcgaaggatctggatgacgccgtcaccgtgacaaagcttgataacggcagc
tacaagctcggcgtccatattgccgacgtcagccattacgtcacggagaattccccgatt
gacaaagaagcgctggaaagagggacaagcgtatacttggttgaccgggtcattccgatg
attcctcacagactgtctaacggaatctgttctttaaatccgaaggtcgaccggctgacg
ctttcctgcgaaatgacaatcaaccagcaggggcaggtaacagagcacgagatcttccaa
agcgtcattaaaacgacggaaagaatgacctattcagatgtcaaccggattctcacagaa
gacgacgccgagctgaaagaaagatatgagccgctcgtcccgatgtttaaagacatggaa
cgtctggcggaaattctccgggcgaaacggatggaccgcggcgccgtggattttgatttc
aaagaggcgaaggtcctcgtcgatgaggaaggcgccgtaaaagacgtcgtcatcagagag
cgctcagtagcggaaaagctgattgaagaattcatgcttgtcgcaaacgaaacggtggcc
gagcacttccattggatgaacgtgccgtttatttaccggattcacgaagagccgaacgcc
gaaaaactgcaaaagtttctggagttcgtcacgacattcggttatatcgtcaaagggaaa
gccggagacattcacccgcgcgcgctgcaaagcattcttgatgaagtacgggaccgtccg
gaagaaacggtgatttcaacggtcatgctccgttccatgaagcaggcgaaatacgacccg
caaagcctgggccatttcgggctggcgactgagttttatacgcacttcacatcgccgatc
cgccgttatcctgacttaatcgttcacaggctgatcagaacgtatttgatcaacggacaa
tcggacgaagcgactcaagaaaagtgggccgaacgccttccggaaatcgctgatcatacg
tcaacgatggaacgtcgtgccgttgatgcagagcgggaaacggacgatctgaaaaaagcg
gaatatatgcttgataaaatcggcgaggaatttgacggcatgatcagttccgtcacgaat
ttcggaatgtttgtcgagctgccgaatacgattgaagggcttgtgcacgtcagctttatg
acggatgattattaccgttttgacgagcagcatttcgccatgatcggtgaacgcacgggc
aacgtttaccgcatcggagacgaaatcacggtcaaagtcgtcgacgtcaataaagatgag
agaaacatcgactttgaaattgtcggcatgaaaggcacccgccgtccgagagaaacgaca
ggcgaccgcagaaaacgcggcagaccggcgcggaaacgcgtgttaaacagcaataccccg
gcttcaccgccgaaatcggaggaaaaaggggaatggtttacaaaaccgaagaagaaaaag
aaaaaacgcggtttccaaaacgcgccgaaacaaaaacgcaaaaagaagaagtaa

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