KEGG T00516: BRADO4084

Bradyrhizobium sp. ORS 278: BRADO4084

Entry

BRADO4084 CDS T00516

Gene name

pdhC

Definition

branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.12)

Orthology

K00627

pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]

Organism

bra Bradyrhizobium sp. ORS 278

Pathway

bra00010	Glycolysis / Gluconeogenesis
bra00020	Citrate cycle (TCA cycle)
bra00620	Pyruvate metabolism
bra01100	Metabolic pathways
bra01110	Biosynthesis of secondary metabolites
bra01120	Microbial metabolism in diverse environments

Module

bra_M00307

Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:bra00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:bra00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:bra00620]

SSDB

Motif

Pfam:

2-oxoacid_dh Biotin_lipoyl E3_binding Biotin_lipoyl_2 HlyD HlyD_2 RnfC_N GCV_H QRPTase_N Neisseria_TspB

Other DBs

NCBI-GI:

NCBI-GeneID:

RhizoBase:

UniProt:

Position

complement(4274105..4275463)

AA seq 452 aa
MPINILMPALSPTMEKGNLARWLKKEGDQVKSGEVIAEIETDKATMEVEAVDEGTLAKIL
VPEGTQDVPVNDVIAVLAGEGEDVKAAGSAPATAAPKAEAKPTASAAPAAAPAPAAAPAP
KPAAAPAPSAPAAAAPQVNGHARIFSSPLARRLAKDAGIDLGRITGTGPHGRVVARDVEE
AKSGKGLKAAPSAAPAAAGAPAVAPSMSDKQILALFEPGSYEVIPHDGMRRTIAQRLTAA
TQTVPHFYLTIDCDIGKLLAAREEINAAAPKDKEKKPLYKLSVNDFVIKAMAVALQKIPN
CNVSWTEGGMVKHKHSDVGVAVAMPGGLITPIIRKAETKTLSAISGEMKDFAARARSRKL
KPEEYQGGTTAVSNLGMYGITHFTAVINPPHATILAVGTSEERPVVRNGKIEIASMMSVT
LSCDHRAIDGALGAELIGAFKQLIENPVMMMV

NT seq 1359 nt +upstreamnt +downstreamnt
atgccgatcaacattctgatgcccgcgctgtcgccgacgatggagaagggcaacctcgct
cgttggctcaagaaggaaggcgaccaggtcaagtcgggcgaggtcatcgccgagatcgag
accgacaaggccacgatggaagtcgaggcggtcgacgaaggcacgctcgccaagatcctg
gtgcccgagggcacgcaggacgtgccggtcaacgacgtgatcgccgtgctcgccggggag
ggtgaggacgtcaaggcggcgggcagcgcgccggcgactgctgcgccgaaggctgaagcc
aagccgacggcttctgcggctcccgctgctgcgccagcgcctgctgccgcgcccgcgccg
aagccggctgcggctcccgcaccgtccgctcctgcggccgctgcaccccaggtcaacggc
cacgcccgcatcttctcgtcgccgctggcgcggcgcctcgccaaggacgccggcatcgat
ctcggccgtatcactggcaccggcccgcatggccgcgtcgtcgcccgcgacgtcgaggag
gccaagtccggcaagggcctgaaggccgcgccgtcggccgctcccgctgccgcaggcgcg
ccggccgtggcgccgtcgatgtccgacaagcagatcctcgcgctgttcgagcccggctcc
tacgaagtcatcccgcatgacggcatgcgtcgcaccatcgcgcagcgcctgaccgccgcc
acgcagaccgtcccgcatttctatctcacgatcgactgcgacatcggcaagctcttggcc
gcgcgcgaggagatcaatgcggcagctccaaaggacaaggagaagaagccgctctacaag
ctctcggtgaacgacttcgtcatcaaggcgatggcggtggcgctgcagaagatccccaac
tgcaacgtcagctggactgaaggcggcatggtcaagcacaagcattccgacgtcggcgtt
gcggttgcgatgccgggcggactgatcaccccgatcatccgcaaggccgagacgaagacg
ctgtcggcgatctcgggcgagatgaaggattttgccgcgcgcgcccgctcccgcaagctg
aagccggaggaatatcagggcggcacgaccgccgtgtcgaacctcggcatgtacggcatc
acgcacttcacggcggtgatcaatccgccgcatgcgacgattctggcggtcggcacatca
gaagagcggccggtcgtgcgcaacggcaagatcgagatcgccagcatgatgagcgtgacc
ctgtcgtgcgaccaccgcgccatcgacggcgcgctcggcgccgagctgatcggcgccttc
aagcagctgatcgagaaccccgtgatgatgatggtgtga

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   RHIZOBASE-BRA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (31)   

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