KEGG   Bradyrhizobium sp. ORS 278: BRADO4398
Entry
BRADO4398         CDS       T00516                                 
Name
(GenBank) hypothetical protein; putative DNA-directed DNA polymerase
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bra  Bradyrhizobium sp. ORS 278
Pathway
bra03030  DNA replication
bra03430  Mismatch repair
bra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BRADO4398
   03430 Mismatch repair
    BRADO4398
   03440 Homologous recombination
    BRADO4398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bra03032]
    BRADO4398
   03400 DNA repair and recombination proteins [BR:bra03400]
    BRADO4398
Enzymes [BR:bra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BRADO4398
DNA replication proteins [BR:bra03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BRADO4398
DNA repair and recombination proteins [BR:bra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BRADO4398
SSDB
Motif
Pfam: RNase_T FAN1_HTH VRR_NUC Rv2179c-like TPR_10
Other DBs
NCBI-ProteinID: CAL78141
RhizoBase: BRADO4398
UniProt: A4YW65
Position
4596533..4598746
AA seq 737 aa
MPGDRRRPRPQEIGAYHMKPTTLPVYYYLDHFVEMLEFVERTYDEILSDEDRAFTSSFRG
LSKDAQCLLIRMVNRRGTIFNRALFKYPEITDLESAARNLIACGYARGLRADDYSAFLLC
QPKTALLDGARAAGFGRDIRASWSKPALADFFLATIPFDVAAMHCGAVGFIALDNTRSID
FLLYLYFGKTADSLKNFALRDLGVLRTNKETSFSSRFVDADEAHACFHYSQVLNRIEARS
VDIYQLAVKAILDGPPRTSDYAADLASRAACQVGQYFEKQGELDVAERLYRFGQSADCRE
RLVRLLYTRGEKDAAELLLREMIDDPESDDEHLFAMDFYARKFGKQRTGLSTALLRSGRL
IVVDDTHRGHPEAGVAGVLRRRGGDVYFAENTLWLTLFGLLFWDELFESGQLNSLFDWVP
HCLRDRTFHRRFAAQIDAKLAQIKSGQGLPIILRVVASKWGRSNGLFAWEHVQIDALRAL
LACANADGLAAILRAMCEDFCGMRDGFPDLMQVRDGKVTFVEVKAEGDAIRRNQLTRLRQ
LEQAGIPAEIGRVDYRFDPEQDYVVVDIETTGSWSSGDRITEIGAVKVRNHQLVEQWHSL
INPQRPIPAKIVELTGITNQMVRDAPVFHEIADSFMAFMGDGIFVAHNVNFDYGFLSSEF
ERLERRFRFPKLCTCVGMRRRYPGHTSYGLGKLCAIYGIELDDHHRALCDARAAAHLLNL
INTKRVEEAEADAVQAA
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgccgggggaccgtcgtcgaccgaggccgcaggaaatcggcgcgtatcacatgaagccc
accacgttgccggtctactattatctcgaccacttcgtcgaaatgctggagttcgtggag
aggacatatgacgagatcctcagcgacgaggaccgtgcattcacctcaagctttcgcggt
ctttccaaagacgcgcagtgcctcttgatccgcatggtcaaccgacgtgggacgatcttc
aaccgcgcgctcttcaagtacccggagattacggacctcgagtccgccgctcgaaacctg
atcgcttgcggatatgcccgtggtcttcgtgccgacgattattccgctttcctgctctgc
caaccgaagaccgctcttctcgacggcgcccgggcggcgggattcggccgcgatatacgc
gcgtcctggtcgaagccggcactggccgactttttcctggcaacaattcccttcgatgtt
gccgcgatgcattgcggcgccgtgggcttcatagccctcgacaacacgcggtccatcgac
tttctgctgtatctctatttcggcaagacggcggacagtctcaagaacttcgctctgcga
gatctcggcgtgctgcgcacgaacaaggagacgtcgttcagctctcgctttgtcgacgcc
gacgaggcgcatgcctgttttcactacagccaggtgctgaaccgaatcgaagctcgttcc
gtcgatatctatcagttggcggttaaggcgatcctcgacggtccgccgcggacgagcgac
tacgccgccgatctcgcgtctcgcgccgcgtgtcaggtcggacagtatttcgagaaacag
ggcgaactggatgttgccgagcgcctctatcgtttcggccagtcggcggactgccgcgag
cgcctcgtccggctgctgtacacccgaggcgagaaggacgccgccgagcttctgttgcgg
gagatgatcgacgatcccgaaagcgacgatgagcacctcttcgccatggacttctacgcc
cgcaagttcggcaagcaacggacgggcctcagcactgcgttgctgcgatccgggcgcttg
atcgtcgtcgacgatacgcaccgcggtcatccggaagcaggcgtcgccggcgtactgaga
cgtcggggcggcgacgtctatttcgccgagaatacgctgtggctcacgctgttcgggcta
ctgttctgggatgagcttttcgaatccggccagctcaacagcctgttcgactgggttccg
cattgccttcgcgaccggacttttcatcggcgtttcgccgcgcagatcgatgcgaagctc
gcgcagatcaaatccggacagggactgcccatcatcctgcgtgtggtcgcctccaaatgg
ggccggtccaacggactgttcgcttgggagcacgtgcagatcgacgcgctacgcgccttg
ctcgcctgtgccaatgcggacggcttggctgcgattcttcgggcgatgtgcgaggacttc
tgcggcatgcgggacggcttccccgacctgatgcaggtgcgcgacggaaaagtgacgttc
gtcgaggtcaaggccgagggcgacgccatacgccgcaatcagttgacgcgtctgcgtcag
ctggagcaggccggcataccggccgagatcggccgcgtggattaccgcttcgacccggag
caagactacgtcgtcgtcgacatcgagaccacgggctcctggtcatcgggtgatcgcatc
accgaaatcggagcggtgaaggtccgcaatcatcaactggtcgagcagtggcactcgctg
atcaacccgcagcggccgatccccgcgaagatcgtcgaactaaccggcatcaccaaccag
atggttcgggatgcgcccgtttttcacgagatcgccgacagtttcatggcgttcatgggg
gacggcatcttcgtggcccacaatgtgaatttcgattacggattcttgtcgagcgagttc
gagcggctcgaacggcgcttccgcttcccgaagctgtgcacctgcgtcggaatgcggcgc
cgatatcccgggcacacatcatatgggctgggaaagctgtgcgcgatctacggcatcgag
ctggacgaccaccatcgagcgctctgcgacgctcgggcggcagcccacctgctgaatctc
atcaacacgaagcgcgtcgaagaggcggaggctgacgcggttcaggcggcgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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