KEGG   Bradyrhizobium sp. ORS 278: BRADO4428
Entry
BRADO4428         CDS       T00516                                 
Symbol
ribD
Name
(GenBank) bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
bra  Bradyrhizobium sp. ORS 278
Pathway
bra00740  Riboflavin metabolism
bra01100  Metabolic pathways
bra01110  Biosynthesis of secondary metabolites
bra01240  Biosynthesis of cofactors
bra02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bra00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    BRADO4428 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BRADO4428 (ribD)
Enzymes [BR:bra01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     BRADO4428 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     BRADO4428 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CAL78171
RhizoBase: BRADO4428
UniProt: A4YW95
Position
complement(4631453..4632604)
AA seq 383 aa
MIFRVLVDQVGEKLKAQKDADRRFMQLALTLGRRGQGRTWPNPAVGAVVVKDGVIVGRGW
TQPGGRPHAEPEALRRAGEAAKGATLYVTLEPCSHFGKSPPCADAVIAAGISRVVSAVED
PNPEVAAQGHAKLRAAGIQVEVGLCSADAKRDHAGHFRRIRDGRPQVILKLAVSADDKIA
AAGSKPVAITGEAARTRVHLLRAQSDAILIGVRTAIADDPLLTCRLPGMEPRSPVRVVLD
PMLRLPSASRLIQSARTTPLWLVASEVAEPATATRLGAAGAQVIRVPPQADPSALEPPAV
LKALAEKGITRLMIEGGSRVASSFMQSGLVDEIWLLRGPREIGADGIAALDALPLTAITQ
SPAYRVRASETLDPDILTIYERV
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgatcttccgggtgctggtcgatcaggtcggcgagaagctgaaggcgcagaaggacgcc
gaccgccgcttcatgcagttggcgctgacgctcggccgtcgcgggcaggggcggacgtgg
ccgaacccggccgtcggtgccgtcgtggtcaaggatggcgtgatcgtcggtcgcggctgg
acccagccgggcggccggccgcatgccgagccggaggcgctgcggcgcgcgggcgaggcg
gccaagggcgccacgctctatgtgaccttggagccgtgctcgcatttcggcaagtcgccg
ccctgcgccgacgcggtgatcgccgccggcatcagccgcgtcgtgtcggcagtcgaggat
cccaatccggaggtcgcggcgcaggggcacgccaagctcagggcggccggcattcaggtc
gaggtcggactgtgctcggcggacgccaagcgcgaccatgccgggcatttccgccgcatc
cgcgatgggcggccgcaggtgatcctcaagctggccgtctcggcggacgacaagatcgcc
gccgcaggcagcaagccggttgcgattaccggcgaagccgcgcgcacgcgcgtgcatctg
ctgcgcgcgcagagcgatgcgatcctcattggggtgcgcaccgcgatcgccgatgatccc
ttgctgacctgccgcctgccgggcatggagccgcggtcgcctgttcgcgtcgtgctcgat
ccgatgctgcggcttccgtcggccagccgtctgatacagtccgcgcgcaccacgccgctg
tggctcgtcgcgtccgaggtggcggagcctgcgaccgcgacaaggctaggcgccgccggt
gcgcaggtgatccgcgtgccgccgcaggccgacccttccgcgctcgagccgcccgccgtg
ctcaaggctctcgccgagaagggtatcacgcgcctgatgatcgaaggcggcagccgcgta
gcatcatctttcatgcagagcggcctcgtcgatgagatctggctgctgcgcggcccccgc
gagatcggcgccgatggcatcgctgcgctggacgcattgccgctgaccgcaatcacgcag
tcgcccgcttatcgcgttcgtgctagcgaaacgctcgatcccgacatccttacgatttac
gagcgcgtgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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