KEGG   Bradyrhizobium sp. ORS 278: BRADO4469
Entry
BRADO4469         CDS       T00516                                 
Symbol
rpoZ
Name
(GenBank) RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
bra  Bradyrhizobium sp. ORS 278
Pathway
bra03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BRADO4469 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bra03021]
    BRADO4469 (rpoZ)
   03400 DNA repair and recombination proteins [BR:bra03400]
    BRADO4469 (rpoZ)
Enzymes [BR:bra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BRADO4469 (rpoZ)
Transcription machinery [BR:bra03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BRADO4469 (rpoZ)
DNA repair and recombination proteins [BR:bra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BRADO4469 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6 MinE
Other DBs
NCBI-ProteinID: CAL78209
RhizoBase: BRADO4469
UniProt: A4YWD3
Position
complement(4669515..4669907)
AA seq 130 aa
MARVTVEDCIDKVDNRFDLVLLAAHRARMISSGSQLTIDRDNDKNPVVALREIADSTISP
EDLKEELVHSLQKFVEVDEPEPDTVPLIGSAGASVDADDTEVAVERMTEEELLKGLEGLA
PPEEQPEEDE
NT seq 393 nt   +upstreamnt  +downstreamnt
atggcgcgcgtcactgtggaagattgtatcgataaagtcgacaaccggtttgacctggtc
ctcctggccgcgcatcgcgcgcgtatgatctcgtcaggttcgcaacttacaattgacaga
gataatgacaagaatcccgttgtggcactccgggagattgcggattcgaccatttctccc
gaggatctgaaggaagaactggtgcattcgctgcagaagttcgtcgaggtcgacgagccc
gagcccgacacggtgccgctgatcggctcggctggtgccagcgtcgatgctgacgacacc
gaggtcgccgtcgagcggatgaccgaggaagagctgctcaagggtctcgaaggtctcgct
ccgccggaggagcagccggaagaggacgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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