KEGG   Bradyrhizobium sp. BF49: BF49_6092
Entry
BF49_6092         CDS       T04337                                 
Name
(GenBank) ATPdependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
brad  Bradyrhizobium sp. BF49
Pathway
brad03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BF49_6092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brad03019]
    BF49_6092
   03009 Ribosome biogenesis [BR:brad03009]
    BF49_6092
Enzymes [BR:brad01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     BF49_6092
Messenger RNA biogenesis [BR:brad03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BF49_6092
Ribosome biogenesis [BR:brad03009]
 Prokaryotic type
  rRNA helicases
   BF49_6092
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1
Other DBs
NCBI-ProteinID: CUT15012
UniProt: A0A160UFW4
Position
I:6259113..6261146
AA seq 677 aa
MSFPTMSAPLARALVERNYDRPTPVQLAVLTDEAADRDLLVSAQTGSGKTLAYGLAMAKD
LLGDDERFERAGAPLALIVAPTRELALQVHRELAWLYEHASGRVVSCVGGMDPRREQREL
AAGAHIVVGTPGRLCDHLRRGRLDISELKVVVLDEADEMLNLGFREDMEFILKTTPDTRR
TLMFSATFPRGIVALAKQYQQRAFRIEVAGDEGGHADIEYRAIRIAPGDAEHAVVNVLRF
YEAPSALVFCSTRDGVRHLQAALLERGFSVVALSGELTQNERTTALQSLRDGRSRVCVAT
DVAARGIDLPSLDLVIHADLPNDAEVMQHRSGRTGRAGRKGTSVMLVPPVRRRRAEMLLN
VSGIDAVWGTAPQPDEIRKLDHERMKDVLFTEEATADDLALAQALLAERSAEEIAASLAR
LYRARLPSPEDIMDPGERSSRPREDRGRNDTRSPRDDFRTPRDDVRASRGDDRPERARPK
AGKSSSKHGMADGSVWFRANIGRKKNAEARWLLPMICRRGGIDKNDIGAIKIMDTTTEFE
ISERVADSFAVKIKRPDKEDNIRLEPMADAPQRQAASEERPHAPRRDSGDSDHRERQGER
AREPNGFKPQGKPHGKPHGKPYEKPYAERTPKFDEAPSFAKKKKHKNKPGHAEPSVTSWS
EKGAPGKKPKTKKKHRA
NT seq 2034 nt   +upstreamnt  +downstreamnt
gtgtcctttccgaccatgagtgcgccgctcgcccgagctttggtcgagcgcaactacgac
cgtccgacccccgttcagctcgccgtgctcacggacgaggccgctgaccgcgacctcttg
gtttcggcccagaccggctccggaaagaccctggcctatgggctggccatggccaaagat
ctgttgggcgacgacgagcggttcgagcgggcgggtgcaccgctcgccctgatcgtggcg
ccgacccgcgagcttgccttgcaggtccatcgcgaactggcttggctgtacgagcatgcg
agcggacgcgtcgtctcctgcgtcggcggcatggatcccaggcgcgagcagcgcgagctc
gcggcaggcgctcatatcgttgtcggtacgcccggccggttgtgcgatcatttgcgccgc
ggtcgtctcgacatctcggaattgaaggtggtcgtgctcgacgaggccgacgagatgctc
aatctcggctttcgcgaggacatggagttcatcctcaagaccacgccggacacgcgccgc
accctgatgttctcggcgacgttcccgcgcggcatcgtcgcgctggccaagcagtatcag
cagcgggcgttccggatcgaggtcgcgggcgacgaaggcggtcacgccgatatcgagtac
cgcgccatccggatcgcgcccggcgatgccgagcacgcggtcgtcaacgtgctgcgcttc
tacgaggcgccgagcgcgctggtgttctgcagcacgcgcgatggcgtccggcatttgcag
gcggcgctgctggagcgcggcttctccgtggtcgctctgtcaggtgaattgacgcagaac
gagcgaaccacggcgctgcagtcgctgcgggacggacgctcgcgcgtctgcgtggcgacc
gacgtcgccgcccgcggcatcgatctgccgagcctcgacctcgtcattcatgccgacctg
cccaacgacgccgaggtcatgcagcatcgctccggccgcaccggccgcgcgggccgcaag
gggaccagcgtcatgctggtgccgcccgtgcggcggcggcgtgcggaaatgctgctgaac
gtctcggggatcgacgcggtctgggggacggcgccgcagccggatgagatccgcaagctc
gatcacgagcgcatgaaggacgtgctgttcacggaggaggcgaccgccgacgatctggcg
ctggcgcaggcgctcttggccgagcggtcggctgaggagatcgccgcgtcactcgcacgg
ctctatcgcgcacggctgccgtcgccagaggacatcatggatcccggcgagcggagcagc
cggccgcgcgaggatcgcggtcgcaacgatacgcgctcgccgcgcgacgattttcgtacg
ccgcgcgacgatgtccgcgcttcgcgtggcgatgatcggcccgaaagggctcgacccaaa
gcgggaaaatcgtcgtcgaaacatggcatggcggatggcagcgtctggttccgggccaac
atcggacgaaaaaagaacgcggaagcacgctggctgttgccgatgatctgccgtcgtggc
ggcatcgacaagaacgatatcggcgcgatcaagatcatggacaccacgaccgagttcgaa
atttccgagcgggtcgcggactccttcgccgtgaagatcaagcgtccggacaaggaagac
aatatccgtctcgagccgatggcggatgcgccgcagcggcaggcggcatcggaagagcgg
ccccacgcgccgcggcgcgacagcggcgacagcgatcatcgtgaacgccagggcgaacgc
gcgcgcgagccgaacgggttcaaaccgcaaggcaaacctcacggcaagccgcacggcaaa
ccgtacgaaaagccgtacgccgagcgcacgccgaaattcgacgaggctccttccttcgca
aagaagaaaaagcacaagaacaagccgggccacgccgagccctcggtcacgtcgtggtct
gagaagggcgcccccgggaagaagccgaagacgaaaaagaagcatcgcgcctga

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