KEGG   Brevundimonas sp. DS20: JL11_03675
Entry
JL11_03675        CDS       T04101                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
brd  Brevundimonas sp. DS20
Pathway
brd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JL11_03675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brd03019]
    JL11_03675
   03016 Transfer RNA biogenesis [BR:brd03016]
    JL11_03675
Enzymes [BR:brd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     JL11_03675
Messenger RNA biogenesis [BR:brd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     JL11_03675
Transfer RNA biogenesis [BR:brd03016]
 Prokaryotic type
  tRNA degradation factors
   JL11_03675
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 PHB_acc_N
Other DBs
NCBI-ProteinID: ALJ07536
UniProt: A0A0P0DBE2
Position
complement(772255..774477)
AA seq 740 aa
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRSPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVKGFKNETQVVVTVLQH
DMENDPDVLSMVAASAALTISGVPFMGPIGAARVGFIDGELVLNPTVDQMEGSDLDLVVA
GTQDALMMVESEAKELSEEAMLKALMFAHAGMQPVIDAIIDLAEHAAKEPFDFQAEDHSD
VVAAIKKLVGEEIKAAYAQPGKYERRSGVDAAKKKAAEALVKTDENPEGVDSSKFSAAFK
ECEADVLRRDIIENAHRVDGRALDKVRAIVSEVGVLPRTHGSALFTRGETQALVVATLGT
GEDEQYIDSLQGTYKESFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPKK
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLVRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVPGITEEIMKQALTQASAGRLHILDEM
SKAMDAPRASLGEHAPKIETIKIAVDKIREVIGSGGKVIREIVEKTGAKVDIGDDGTIKI
AANDQEKIDAAKAWIQSIASEPEVGAIYSGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQTTGEDITDKINAERAERGEEPLS
EDTGGRPKREGGDRGRRRRD
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgttcgatatcaaacgcaagacgatcgagtgggccggacgcccgctgactctggagacg
ggccgcatcgcccgccaggccgacggcgccgtgctggcgacctacggcgagaccgtggtt
ctggccaccgtcgtctacggccgttcgcccaagccgggcctggatttcttccccctgacg
gtcaactaccaggaaaagaccttcgccgccggcaagatcccgggcggctacttcaagcgt
gaaggccgcccgaccgagaaggagaccctggtttcccgcctgatcgaccgcccgatccgc
cccctgttcgtcaagggcttcaagaacgagacccaggtcgtcgtcaccgtgctgcagcac
gacatggagaacgaccccgacgtcctgtcgatggtcgccgcctcggccgccctgaccatt
tccggcgtgcccttcatgggtccgatcggcgccgcccgcgtcggcttcatcgacggcgag
ctggttctgaacccgaccgtggaccagatggaaggctccgacctggatctggtggtcgcc
ggcacccaggacgccctgatgatggtggaatccgaggccaaggagctgtcggaagaggcc
atgctgaaggccctgatgttcgcccacgccggcatgcagccggtgatcgacgccatcatc
gatctggccgaacacgccgccaaggagcccttcgacttccaggccgaagaccattccgac
gtcgtcgccgcgatcaagaaattggtcggcgaggagatcaaggccgcctacgcccagccg
ggcaagtacgagcgccgctcgggcgtcgacgccgccaagaagaaggccgccgaagccctg
gtgaagaccgacgagaaccccgagggcgtcgacagctccaaattctcggccgccttcaag
gaatgcgaagccgacgtcctgcgtcgcgacatcatcgagaacgctcaccgcgtcgacggc
cgtgccctggacaaggtccgcgccatcgtatcggaagtcggcgtcttgccgcgcacccac
ggttcggccctgttcacccgcggcgaaacccaggccctggtcgtcgccaccctgggcacc
ggcgaggacgaacagtacatcgacagcctgcagggcacctacaaggagtccttcctgctg
cactacaacttccccccctattcggtgggtgaagccggccgcatgggctcgcccggccgt
cgcgaaatcggtcacggcaagctggcctggcgggccatccgtccgatgctgccgaagaag
gaagacttcccctacaccatccgcctggtctccgagatcaccgagtcgaacggctcgtcc
tcgatggccacggtctgcggttcgtccctggccctgatggacgccggcgtgccgctggtc
cgtccggtctcgggcatcgccatgggcctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggcgacgaagaccacctgggcgacatggacttcaaggtcgccggc
acctcggaaggcatcacctcgctgcagatggacatcaaggtccccggcatcaccgaggag
atcatgaaacaggccctgacccaggcctctgccggccgcctgcacatcctcgacgagatg
tccaaggccatggacgccccgcgcgcctcgctgggcgaacatgcgcccaagatcgagacg
atcaagatcgcggtcgacaagatccgtgaagtgatcggttcgggcggcaaggtgatccgc
gagatcgtcgagaagaccggcgccaaggtcgacatcggcgacgacggcacgatcaagatc
gccgccaatgaccaggagaagatcgacgccgccaaggcctggatccagtccatcgcctcg
gaaccggaagtgggcgccatctactccggcaaggtggtcaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgctctggaa
cgcgtcgccaacccggccgacgtcctgtcggaaggccaggaggtcaaggtcaagttcctg
ggcttcgacgaccgcggcaagaccaagctgtcgatgaaggtcgtggaccagaccaccggc
gaagacatcaccgacaagatcaacgccgaacgcgccgaacgcggcgaggagccgctgtcg
gaagacaccggcggccgtcccaagcgcgaaggcggcgatcgcggccgtcgccgtcgcgac
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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