KEGG T01355: RBRH

Burkholderia rhizoxinica: RBRH_03043

Entry

RBRH_03043 CDS T01355

Definition

exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

brh Burkholderia rhizoxinica

Pathway

brh03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:brh03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 AAA_11 Helicase_RecD Viral_helicase1 UvrD-helicase DUF2075 AAA_22 HTH_23 CbiA Flavi_DEAD AAA_25 AAA_16 T2SE DEAD

Other DBs

NCBI-GI:

312602469

NCBI-GeneID:

9979715

UniProt:

E5AUM1

Position

pBRH01:complement(374251..376326)

AA seq 691 aa
MMTDIMLAQGFSRRIGALAQSLGAAAGDARVAAAAAAMVSAATANGHVCIELAALARQLG
QPSDTVRASLLASGVATRIDDDEPAPRLPLVIDLDDRLYLARYYEFERGLANALSARARA
EFDDASFDDAQRWRNVLTRYFGEASGSDLDWQRVAAAVALSGQLTIVSGGPGTGKTTTVV
GVLACLLDAKPDLRIALAAPTGKAAQRMLEALASRADRLAHDIAAKLPTASYTLHRLLGS
TSDRGFRHHRRNSLPYDVIVVDEASMIDVALASRLVDAVAPRARLILLGDKDQLAAVDAG
AVFAELSAHPCYVGQRAERIAQALGCTVDTLRNALAAHVRGGLPQLQPATLGQAATPTRL
TASAPPAAPAPPSASAQRDLFADDNPAVGADIVEPAPNDTARAADGAQPAALANCVVWLQ
TNYRFGLDSPIGQLSSAIRDGSPADALGVLDAADDRAPAHFIDDGGPAIGHAARDYIARG
FARYANLLAGMLQRCESQAAALFDALNAFRVLCAVRAGPHGVDALNEWISAELRRVARLP
LAPAARWFAGRPVIVTRNDYALGLFNGDIGIALPAGDGTLRVVFEQGAGQRRSVSPAMLP
SHETAFALTVHKSQGSEFERAALVLPPTFSRALSRELIYTAVTRARAQITIIGTRAVLAQ
AIGTPTRRDTGLSARLRYAEARARRETASSR

NT seq 2076 nt +upstreamnt +downstreamnt
gtgatgactgacatcatgctggcccaggggttctcgcgccggatcggcgcgctcgcgcaa
agcttgggggcagccgccggcgatgcacgcgtcgctgctgctgctgccgcgatggtcagc
gcggcgactgcaaatggacatgtctgcatcgagctggcagcgcttgcgcggcaactcggg
cagccgtccgacacagtccgcgcgtcgctgcttgcaagcggtgttgccacgcgcatcgat
gacgacgagccggcgccccgtttgccgctggtaatcgacctcgatgaccgactgtatctc
gcacgctattacgaattcgagcgtgggcttgctaatgcactgagtgcgcgcgcgcgggcg
gaatttgacgatgcgtcgtttgatgacgcgcagcggtggcgtaacgtactgacccgctat
tttggcgaggcgagcggcagcgacctcgactggcagcgtgtcgcggcggctgtcgccttg
tccgggcaactgacgattgttagcggtgggccgggcacgggtaagacgaccacggtcgtc
ggcgtgctagcctgtttgctcgatgccaagccggatctgcgcatcgcgctggcggcgccc
actggcaaggcagcacagcgcatgctggaggcattggcgtcccgcgccgaccgattggct
cacgatatcgccgccaagctgccgaccgcgtcgtatacgctgcatcgattgctgggcagc
acatcggacaggggttttcgccatcatcggcgcaattctttgccgtacgatgtcatcgtc
gttgacgaggcttcgatgatcgacgtcgcgctggcaagccggttggtggacgccgttgca
ccgcgtgcccggttgatcctgctgggtgacaaggaccaattggccgcggtcgacgcgggg
gcagtgttcgccgaactgagtgcacatccatgctatgtcgggcagcgcgccgagcgtatc
gcgcaggcgcttggctgcacggtcgatacattgcgcaacgcgctcgccgcgcatgttcgc
ggtggcctgccccaattgcagcctgctaccttggggcaggctgctactccgacgcggctt
accgcatccgcaccgcctgccgcgccggccccgccctcagcgtctgcacagcgcgatctg
ttcgccgacgacaatccggcggttggggcagatatcgtcgagccagcgccgaacgacacg
gcacgtgcggcagacggtgcacagcctgctgcgctcgccaattgcgtcgtgtggttgcag
accaactatcggttcggcctcgattccccgatcgggcagctgtccagtgcaattcgcgac
ggctcgcctgcggacgcgctcggcgtgctcgatgcagcagacgatcgcgcgcccgcacac
ttcatcgatgacggcgggccggcaatcggacacgcggcacgcgactatatcgcgcggggt
ttcgcacgctatgcaaatctgctggccgggatgctgcagcggtgtgagtcacaggccgct
gcgctgttcgatgcgctcaacgcattccgtgtgctgtgcgcggttcgcgctggcccgcat
ggcgtcgatgcgttgaacgagtggatcagcgctgaactgcgtcgggttgcccgcttgccg
cttgcaccggccgcccggtggttcgctggccgtccggtcatcgtcacgcgcaacgactat
gcactcggcctgttcaatggcgacatcggcatcgcgctgccggccggcgacggcacgctg
cgggtggtcttcgaacagggtgccgggcagcgccggagcgtgtcgcccgcgatgctgccg
tcgcacgagacggcattcgcgctcacggtccacaaatcacagggttcggaattcgaacgg
gctgcgctggtgttgccgcctacgtttagccgggcgttgtcgcgagagttgatttacacg
gctgtgacccgcgcgcgggctcaaatcacgattatcggcacgcgtgcggtgttggcacag
gccatcggcacgccgacccgccgcgataccggactgtcggcacggttacgatacgctgag
gcgcgtgcacggcgcgaaacagcctcatcacgataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (25)   

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