KEGG   Mycetohabitans rhizoxinica: RBRH_03275
Entry
RBRH_03275        CDS       T01355                                 
Name
(GenBank) Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
brh  Mycetohabitans rhizoxinica
Pathway
brh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:brh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    RBRH_03275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brh03400]
    RBRH_03275
Enzymes [BR:brh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     RBRH_03275
DNA repair and recombination proteins [BR:brh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     RBRH_03275
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: CBW74052
UniProt: E5AMX1
Position
499836..501212
AA seq 458 aa
MTAEFSPPAPFVGGDAVIPVSALNRAIGTLLERAFALAWIAGEVSNFTRAASGHWYFSIK
DDCAQIRCVMFRGRAQYAQFTPREGDRIEVRATVTMYEPRGELQLNVEAVRRTGQGRLYE
AFLKLKAQLEAEGLFAAERKRVLPSHPRAIGIVTSLQAAALRDVLTTLARRAPHVPIIVY
PAPVQGAEAAARVAAMIVTANRRAEVDVLIVCRGGGSIEDLWAFNDESLARAIASSTLPI
VSGVGHETDFTIADFAADVRAPTPTAAAELVSAQRTMLLRELDHRHAALARGFGRMMERR
AQQLDWLARRLVSPSERIARQRQHLRQLSLRLCSAGARPVRDARARLTMVQLRWRRSQPD
TERAAERVQRLGQRLRDALHRQHERRRAQVSELAARTELLSPRRTLERGYAALIDPHSGA
AVRAPDALNPGGRVTVHLAHGSADLGIAHVQPRLDEEF
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgacagcagaattttcccccccggccccctttgtcggcggcgacgcggtgattcccgtg
tccgccttgaatcgcgcgatcggcaccctgctcgagcgtgcatttgcgcttgcctggatc
gccggcgaagtctcgaactttacgcgggcagccagcggccattggtatttctcgatcaag
gacgattgcgcgcagattcgttgcgtgatgttccgtggccgtgcccaatatgcacagttc
acgccgcgcgagggcgaccggatcgaggtgcgtgccacggtgacgatgtacgagccgcgt
ggcgagttgcaactgaacgtggaggcggtccggcgcactgggcaaggtcggctgtacgaa
gcatttttgaagctgaaggcgcagctcgaggccgagggcctgttcgccgctgagcgcaag
cgcgtgctgccgtcgcacccgcgggccatcggtatcgtcacgtcgctgcaagccgcggcg
ctgcgtgacgtgctgactacgcttgcacggcgcgccccgcatgtaccgatcatcgtctac
ccggcgccggtgcagggcgctgaggcggccgcgcgtgttgcggcaatgatcgtcacggcc
aatcgtcgtgccgaagtcgatgtgctgatcgtgtgccgcggcggtggttcgatcgaggac
ttgtgggcgttcaacgatgaatcgcttgcgcgggcgattgcctccagcacattgccgatc
gtgtccggcgttgggcacgaaaccgatttcaccattgctgacttcgcggctgatgtccgc
gcgccgacgccgacggcggcagcggaactggtcagtgcgcagcgcaccatgctgttgcgc
gagttggaccatcgccacgcggcgctggcgcgcggcttcggccggatgatggagcggcgc
gcgcagcagttggactggctcgcgcgccggctggtgagcccatccgagcggatcgcccgg
cagcgtcagcacctgcggcaactgtcgctgcggttgtgttcggccggcgcgcgtccggtg
cgagacgcgcgcgcgcggctgacgatggtccagttacgctggcggcgcagccagcccgac
acagagcgggcagctgaacgggtgcaacggctcgggcagcgcctgcgcgatgccctgcac
aggcagcatgagcgtcgacgcgcgcaggtatccgagttggctgcccgcaccgaattgctc
agtccgcggcgcacgctggagcgcggctatgcggcgctgatcgacccgcacagcggcgcg
gcggtgcgcgcgccggacgcgctcaatccgggcggccgcgtgacggtgcatctcgcgcac
ggcagcgcggatttgggcattgcgcacgtgcagcctcgcctggatgaggaattctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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