KEGG   Mycetohabitans rhizoxinica: RBRH_03644
Entry
RBRH_03644        CDS       T01355                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
brh  Mycetohabitans rhizoxinica
Brite
KEGG Orthology (KO) [BR:brh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:brh03009]
    RBRH_03644
Enzymes [BR:brh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     RBRH_03644
Ribosome biogenesis [BR:brh03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RBRH_03644
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: CBW74962
UniProt: E5AQT0
Position
1317458..1319149
AA seq 563 aa
MNENHDPDSPESGPARVAAVDDRDAGQRALPVLPAAEGGEGEERPRRGLRRGPRSLIARR
RAVAKSKATDAIGAAPATVTEAPPDGEVVAHVRMPRKDPANKRQGKGAKRDPEARRDADA
PRREPRARRDASAAPAGGSPKAGGRDDDVFAYVTSPAFDADNTGAGSVRAPMLRRGRKGG
VPAGKRALSADDDAPKLHKVLAEAGMGSRREMEELIIAGRVSVNGEPAHIGQRIMPTDQV
RINGKPVKRKLPNKPPRVLIYHKPAGEIVSHADPEGRPSVFDKLPPMKTAKWLAVGRLDF
NTEGLLLLTTSGDLANRFMHPRYQVEREYAVRVIGELAESARQKLLNGVELDDGPASFLR
IQDGGGEGTNRWYHVALAEGRNREVRRMFEAVGLTVSRLIRTRHGPIVLPRGLKRGRWEE
LEDNQVRALMSAVGLKGPGEDKAERSKATPRRQPDPMQTALGYISYDAPGPQRRFGRGAR
GGANWTSSTPPVPGYTGFAAAHGHGNMTGGKHDNRDVNGNQASGKGGNRAQKGKPRGGRG
AQTALRQDGVRQGGAPRGRPRGR
NT seq 1692 nt   +upstreamnt  +downstreamnt
ttgaacgagaaccacgatcccgattctcccgagtccggtcctgcccgcgtggcggccgtg
gacgatcgcgatgcgggccagcgcgccttgccggtgctgccggccgcggaaggcggcgaa
ggcgaagagcggccacggcgcggtttgcgccgcggaccgcgcagcctgatcgctcgccgt
cgtgcggtggccaagtcgaaggcgaccgatgccatcggtgctgcgccggccacagtgact
gaggcgccgcccgacggcgaggtggtcgcgcatgtacgcatgccccgtaaggaccccgcc
aacaagcgtcagggcaagggcgccaagcgtgaccctgaggcgcgccgcgatgccgacgcg
ccccgtcgcgagccgcgcgcgaggcgtgacgccagcgcggcgccggccggcggttccccg
aaagccggagggcgtgacgacgacgtatttgcctacgtcacgtcgccggcgttcgatgcc
gacaacaccggtgcgggtagtgtgcgcgcgccaatgctgcggcgcggccgcaagggtggc
gtgcccgctggcaagcgcgcgttgtcggccgacgacgatgcgccgaagctgcacaaggtg
cttgccgaggccggcatgggctcgcgtcgtgaaatggaagaattgattattgctgggcgc
gtgtcggtcaatggcgagccggcgcacatcggccagcggatcatgccaaccgaccaggtg
cgcatcaatggcaagccggtcaagcgcaagctgccgaacaagccgccgcgcgtgctgatc
tatcacaagccggcaggcgagatcgtcagccacgcggatccggaaggtcgcccgtcggtg
ttcgacaagctgccgccgatgaagacggcgaaatggctggccgtcggtcggctggatttc
aataccgaaggcttgttgttgctgaccacgtctggtgacctcgcaaaccgcttcatgcat
ccgcgctaccaggttgagcgcgaatatgcggtgcgggtcatcggcgaattggccgagagc
gcgcggcaaaagctgctcaacggcgtcgagctcgatgacggtccggcgagcttcctgcgc
attcaggatgggggtggcgaaggcaccaatcgctggtaccacgtggcgcttgcagaaggg
cgcaaccgcgaggtgcgtcgcatgttcgaagccgtgggcctgaccgtcagccgattgatc
cgcacgcgccatggcccgatcgtgctgccgcgtggcctcaagcgtggccgctgggaagaa
ctcgaggacaaccaggtgcgcgcgttgatgtcagccgtcgggctgaaagggccgggcgag
gacaaggcggagcgcagtaaggcgacgccgcgtcgccaacccgatccgatgcaaacggcg
ctcggctatattagctacgatgcgccaggtccgcagcgacgatttggccgcggtgcgcgc
ggcggcgcgaactggacttcgtccacgccgccggtgcctgggtataccggctttgccgct
gcgcacgggcacggcaatatgacgggtggcaaacacgataaccgtgacgtcaacggcaac
caggcatccggcaagggcggcaaccgtgcgcaaaagggcaagccgcgtggcggtcgcggt
gcgcagacggcgctgcggcaagatggcgtgcgtcagggcggtgcaccgcgggggcgcccg
cgcggtcgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system