KEGG   Bradyrhizobium sp. SK17: CWS35_22400
Entry
CWS35_22400       CDS       T05325                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
brk  Bradyrhizobium sp. SK17
Brite
KEGG Orthology (KO) [BR:brk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:brk03016]
    CWS35_22400 (rnd)
Enzymes [BR:brk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CWS35_22400 (rnd)
Transfer RNA biogenesis [BR:brk03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CWS35_22400 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC DUF2292
Other DBs
NCBI-ProteinID: AUC96693
UniProt: A0A2K8YGV8
Position
complement(4891675..4892823)
AA seq 382 aa
MDLISTTSDLAAACDRLAQHKVITVDTEFLRETTYYPLLCVVQMASADEAIVVDALAPGI
DLKPFFELMSNEAVLKVFHAARQDIEIVWHLSGTIPHPIFDTQVAAMVLGYGDSIAYDQL
VDRVTGHRPDKTHRFTDWSRRPLTDEQLHYAVSDVTHLREVFAALDADLKKRDRSDWVSE
EMEVLTSPKTYDFHPERAWERLKTRVRKPRELAVLIEVAAWREQEAQGRDVPRSRVLKDD
AVGDIATHAPTSLEKLGNLRSLPKGFERSKWGADIIAAVQRGLARDQATLPKLEKPRNNS
NGAATVELLKVLLRMTSERHGVASKVIATVDDLEQIAASDQAEVGALHGWRRELFGEAAL
KLKHGQVALAIDKGRVVRVDRG
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggatctgattagcacgacctccgacctcgccgccgcctgtgatcggctcgcccaacac
aaggtcatcaccgtcgacaccgagttcctgcgggagacgacctattacccgctgctctgc
gttgtgcagatggcaagcgccgatgaggccatcgtggtcgatgcgctggcgcccggcatc
gacctcaagccgttcttcgaactgatgtcgaacgaggccgtgctgaaggtgttccacgcc
gcgcggcaggacatcgaaatcgtctggcatctgtccggcacgatcccgcatccgatcttc
gacactcaggtcgccgcgatggtgctcggctatggcgacagcatcgcctatgaccagctt
gtcgatcgcgtcaccggccaccgccccgacaagacgcatcgcttcaccgactggtcgcgc
cgcccgctgaccgacgagcaactccactacgcggtctccgacgtcacccatctgcgtgaa
gtgttcgccgccctcgacgccgatctgaagaagcgcgaccgcagcgactgggtcagcgag
gagatggaggtgttgacctcgccgaagacctacgacttccatcccgagcgggcctgggag
cggctcaagacccgcgtgcgcaagccgcgcgagctcgcggtcctgatcgaggtcgcggcc
tggcgcgagcaggaagcgcagggccgcgacgtgccgcgctcgcgcgtgctcaaggatgat
gcggtcggcgatatcgccacccacgcgccaacctcgctggagaagctcggcaatctgcgt
tcgctgccgaagggtttcgaacgctcgaaatggggcgccgacatcatcgccgcggtgcag
cgcgggctggcccgcgaccaggcaacactgcccaagctggaaaagccgcgcaacaattcc
aacggcgcggcgaccgtcgagctgctgaaggtgctgctgcgcatgacctcggaacgccac
ggcgtcgccagcaaggtgatcgcgaccgtcgacgatctcgagcagatcgcggccagcgat
caggccgaagtcggcgccctgcatggctggcggcgtgaattgttcggcgaggcggcactg
aagctcaagcacggccaggtcgcgctcgcgatcgacaaaggccgcgtggtgcgggtggac
cggggttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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