KEGG T01229: Bmur

Brachyspira murdochii: Bmur_1480

Entry

Bmur_1480 CDS T01229

Definition

NAD-dependent DNA ligase (EC:6.5.1.2)

Orthology

K01972

DNA ligase (NAD+) [EC:6.5.1.2]

Organism

brm Brachyspira murdochii

Pathway

brm03030	DNA replication
brm03410	Base excision repair
brm03420	Nucleotide excision repair
brm03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:brm03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:brm03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:brm03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:brm03430]

SSDB

Motif

Pfam:

DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD HHH PTCB-BRCT

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1685564..1687555)

AA seq 663 aa
MNKEEAKQKIKQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP
TNKVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLDFDNRMQRELDASNIKYTVENKFDGL
ALELIYEKGKLTVASTRGDGQVGENVTNNVKMMSNVPKSIKEKNKLIVRGEALITKKDFE
ALNKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTNEYKSM
EFLSDLGFTVEGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKYQEKLGFLS
RAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNPNEI
KSKDIRIGDTVVVIRSGDVIPKITRVVLEKRPEDSKPFEFPKKCPVCGGDTAVTDGDVIV
RCINEECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRDDLFKF
ERMGDKLASYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIENFKKAAIED
LQNIEGIGEISAKSIYDFLHNERTLKLIDDLLAAGVNPVFEKVVTVESPLTGKNVVITGS
IEGFTRTSAKEAAERLGAAVQSAVSKNTDILIVGEKAGSKLKKAQDLGIAIMEADEFIKL
ANS

NT seq 1992 nt +upstreamnt +downstreamnt
atgaataaagaagaagctaaacaaaaaataaaacaattaacagaaactattaattaccat
aataaactttattatacagatgataaccctgaaatagaagattatgaatacgataaactt
tttagagaattagaaaatcttgaaagagagtttccagaattaaaaaaagatgacagtcct
acaaataaggttggaggcactatattagaaaagtttgaaaagtttgaacacccaattgca
atgtactctctttctaatgttatgaacgaagaggagtttttggactttgataatagaatg
caaagagagcttgatgctagtaatattaaatacaccgtagaaaataaatttgacggactt
gctttagagcttatttatgaaaaaggaaaactcacagtagcaagcacaagaggagacgga
caagttggagagaatgttaccaataatgttaagatgatgagcaatgttcctaaaagcata
aaagaaaaaaataaactcattgtaagaggcgaagcattaataacaaaaaaagattttgaa
gcattaaataaagaaagagaagagcttgaagagataccttttgccaatgcaagaaatgct
gcctcaggcggattaagacaattagacagtgcagaaagtaaaaaaagaagattaaaattc
tttgcatatcaaatagctaattataaagattttgatttaactaatgaatataaatcaatg
gagtttttatccgatttaggttttacagtggaaggagtacatccaaatattgacgctaaa
aaagtattagaaacttattatgatatacaggaaaaaagaagcaaaatggattatgagatt
gacgggcttgtaataaaagttgatgatgtgaaatatcaggagaaattgggatttttatca
cgtgctccaagatttgcagtagcttttaaattcaaacccgaagagaaagaaacagtttta
aagaatattgaagtgcaggttggacgaactggagcattaacaccagttgccaaattagag
cctgttcaagttggaggcgttactgtttctaatgttacacttcataatcctaatgaaata
aaatcaaaagatataagaatcggagatactgttgtagttatacgttccggcgatgttata
ccgaagattacaagagtagtattagaaaagcgtcctgaagacagcaaaccttttgagttt
cctaaaaaatgtcctgtatgcggtggtgatactgctgtaactgacggcgatgtaatagta
agatgtatcaatgaagagtgtccaagtaagataacaagatatatagagtatttcgtttca
aagcctgctatgaatatggagcgaataggcaaagaatggattgctgtatttacaaaaagc
ggacttgtaaaaactccagcagatctttacaaaataacaagagatgatttatttaagttt
gaaagaatgggagataaattagcaagctacatgctcgaatccattgaaaatagtaaaaac
actaccttaaaaagatttatatatgcattgggtattcgtcaggttggtgaaactactgcg
gacttacttgctaaatattttacttctatagagaatttcaaaaaagctgctattgaagac
ttacaaaatatagaaggtataggcgaaataagtgctaaaagtatttacgacttccttcat
aatgaaagaacattaaagttaatagatgatttacttgcagcaggagttaatccagtattt
gaaaaagtagtaacagtggaatcgcctcttaccggaaagaatgttgtaataacaggctca
atagaaggttttacaagaacttcggcaaaagaggcggctgaaagattgggagctgctgtt
cagtcggcagtatcaaaaaatactgatattttaatagtaggtgagaaagctggaagcaaa
ctaaaaaaagctcaggatttaggtatagcaataatggaagccgatgagtttataaagctt
gctaatagctaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BRM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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