KEGG   Bradyrhizobium sp. ORS 285: BRAD285_5960
Entry
BRAD285_5960      CDS       T04956                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
bro  Bradyrhizobium sp. ORS 285
Pathway
bro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BRAD285_5960 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bro03400]
    BRAD285_5960 (uvrB)
DNA repair and recombination proteins [BR:bro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BRAD285_5960 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BRAD285_5960 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H Kinesin AAA_22 SWI2_SNF2 Microtub_bd DUF87 eIF3_p135
Other DBs
NCBI-ProteinID: SMX60732
UniProt: A0A1Y6KLZ4
Position
5975818..5978904
AA seq 1028 aa
MAKTPDTPKKPGRTPKSKAHRPDVQPIAPALAELLNPAINRGESGIGSSTGLKPPPDNSW
DRRSGGEAAAHRARASTKSKSEDLATRDGSERAMPLRPNPQPAGARSSQAADESDEATGL
SEAPQANYGTAATIPTLDPELARQLGLPTAEDDDEALARPPRSKMEALGVKATAEALESL
IREGRPEFRKDDGSLRVWTPHRPPRPEKSEGGVRFEIKSAYEPKGDQPQAIKELVEGIAR
NDRTQVLLGVTGSGKTYTMAKVIEATQRPAIILAPNKTLAAQLYGEFKSFFPDNAVEYFV
SYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHAATRALLERDDVIIVASVSCIYGIGS
VETYTAMTFALKKGERIDQRQLIADLVALQYKRTQHDFTRGTFRVRGDVIDIFPAHYEDR
AWRVNLFGDTVENIEEFDPLTGHKQDELEFIKVYANSHYVTPRPTLVQAMKSIKSELRMR
LDQLHAQGRLLEAQRLEQRTTFDLEMMEATGSCAGIENYSRYLTGRLPGEPPPTLFEYVP
DNALVFADESHVTVPQIGGMFRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDMMRPQTV
AVSATPAAWEINEAGGVFVEQVIRPTGLIDPPVDIRPARTQVDDLLGEVRATAQKGYRSL
ITVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTIERIEIIRDLRLGAFDALVGINLLREGL
DIPECALVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQVTGSMERAMAETTR
RREKQMEYNTLNGITPESVKKSIGDILNSVYERDHVLIETGGGTTTDDVISIGHNFEAVL
ADLETRMREAAADLNFEEAARLRDEVKRLRATELAVVDDPTAKQRTVQDKAGSYAGAKKY
GDAANLPTAAMKGRGDRAASSPSPGGGGSAAKGGRGRMKPRDPLAPSLDDILSGGSSSGS
KVHKPHLDEMHGPESLPYRPNAKLPPKPFGSSSKIIQPTNSRESGPEFGPAPRSTGGAPG
KRGGWKKR
NT seq 3087 nt   +upstreamnt  +downstreamnt
atggcgaagacccccgacactcccaaaaagcccggccgtacaccgaaatccaaggcgcac
cgtccggacgttcagccgatcgcgccggcgcttgccgagttgctcaaccccgccatcaac
cgcggcgagagcggcatcggctcatcaacgggactgaagcctccgccggacaattcctgg
gaccggcgcagcggcggcgaggcggcagcgcatcgtgcgcgggcctcgaccaagagcaag
agcgaggacctcgcgacgcgtgacggctcggagcgcgcgatgccgctgcggccgaatccg
cagccggccggcgcgcgttcgagccaagccgccgatgagagcgacgaagcaacgggcctc
tccgaagcgccgcaggccaattacggcaccgccgccaccatccccacgctcgatccggaa
ctggcgcggcagctcggcctgcccacggccgaggatgacgatgaagccctcgcccgcccg
ccgcgcagcaagatggaggcgctcggcgtcaaggccacggcggaagcgctggagtcgctg
atccgcgaggggcgtcctgagttccgcaaggacgacggctcgctgcgcgtctggaccccg
catcgcccgccgcgcccggaaaagagcgaaggcggcgtccgcttcgagatcaagtcggcc
tacgagcccaagggcgaccagccgcaggcgatcaaggagctggtcgagggcatcgcgcgc
aacgaccgcacccaggtgctgctcggcgtcaccggctccggcaagacctacaccatggcc
aaggtgatcgaggcgacgcagcgtcccgcgatcatcctcgcgccgaacaagacgctcgcc
gcgcagctctatggcgagttcaagagcttcttcccggacaacgcggtcgagtacttcgtc
tcctattacgactactaccagcccgaggcctacgtcccgcgcaccgatacctatatcgag
aaggactcctcgatcaacgagcagatcgaccgcatgcgccacgccgcgacgcgcgcgctg
ctggagcgcgacgacgtcatcatcgtcgcctcggtgtcctgcatctacggtatcggctcg
gtcgagacctacaccgcgatgaccttcgcgctgaagaagggcgagcgcatcgaccagcgc
cagctgatcgccgacctcgtcgccctgcaatacaagcgcacgcagcacgatttcacccgc
ggtacctttcgtgtccgcggcgacgtcatcgacatcttcccggcgcactatgaggaccgc
gcctggcgcgtgaacctgttcggcgacaccgtggagaacatcgaggagttcgatccgctc
accggccacaagcaggacgagctggagttcatcaaggtctacgccaattcgcactatgtc
acgccgcgccccaccctggtgcaggcgatgaagtcgatcaaatccgaattgaggatgcgg
ctcgaccagctgcacgcgcaaggccgcctgctcgaggcgcagcggctggagcagcgcacc
accttcgatctggagatgatggaggcgaccggcagctgcgccggcatcgagaactactcg
cgctatctcaccggacgcctgcccggcgagccgccgccgacgttgttcgaatacgtcccc
gacaacgcgctggttttcgccgacgagagccacgtcaccgtgccgcagatcggcggcatg
ttccgcggcgacttccgccgcaaggcgacgctggccgaatacggcttccgcctgccctcc
tgcatggacaaccgcccgctgcgcttcgaggaatgggacatgatgcggccgcagacggtc
gcagtgtcagctactcctgcggcctgggagatcaacgaggccggcggcgtgttcgtcgag
caggtcatccgtccgaccggactgatcgacccgcccgttgatatcaggcccgcccgcacc
caggtcgacgacctcctcggcgaggtccgcgccacagcgcagaagggctatcgctcgctg
atcacggtgctgaccaagcgcatggccgaggacctcaccgaatatctgcacgagcagggc
atccgcgtccgctacatgcacagtgacatcgacaccatcgagcgcatcgagatcatccgc
gaccttcgcctcggggcgttcgacgcgctggtcggcattaacctgctgcgcgagggcctc
gacattcccgaatgcgctctggtcgcgatcctcgacgccgacaaggaaggtttcctgcgc
agcgagacctcgctgatccagaccatcggccgagccgcgcgcaacgtcgacggcaaggtc
atcctctatgccgaccaggtcacgggctcgatggagcgcgcgatggccgagaccacgcgc
cgccgcgagaagcagatggagtacaacacgctcaacggcatcacgccggagagcgtgaag
aagtcgatcggcgacatcctcaactcggtctatgagcgcgaccacgtgctgatcgaaacc
ggcggcggcacaaccaccgacgacgtcatctcgatcggccacaatttcgaggccgtgctc
gccgacctcgaaacccgcatgcgcgaggccgccgccgacctgaacttcgaggaagccgcc
cgcctccgcgacgaagtcaagcgcctgcgcgccaccgagctcgccgtcgtcgacgacccc
accgccaagcagcgcaccgtgcaggacaaggccggctcttacgccggcgccaagaaatac
ggcgacgccgccaatctaccgacggctgcgatgaagggccgcggcgaccgcgcggcctct
tcaccctcccctggagggggagggtcggccgccaagggcggccggggtaggatgaagccc
cgcgacccgctcgcgccatcgctcgacgatatcctcagcggcggctcaagcagcggctcc
aaggtccacaagccccatctcgacgagatgcacggcccagagtccctgccctaccgcccc
aacgccaagctgccgcccaaacctttcggcagcagcagcaagatcatccagccaaccaac
tcgcgggagtccggcccggaattcggccccgcaccacgatcgaccggcggcgcaccaggg
aagcgcggtgggtggaagaagcggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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