KEGG   Brassica rapa (field mustard): 103829539
Entry
103829539         CDS       T03449                                 
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03030  DNA replication
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103829539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brp03032]
    103829539
Enzymes [BR:brp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103829539
DNA replication proteins [BR:brp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    103829539
SSDB
Motif
Pfam: DNA_pol_B zf-DNA_Pol DNA_pol_B_exo1 DNA_pol_alpha_N DNA_pol_B_exo2 DNA_pol_B_2
Other DBs
NCBI-GeneID: 103829539
NCBI-ProteinID: XP_009103454
UniProt: A0A397YKK1
Position
A07:complement(14705852..14714447)
AA seq 1526 aa
MSGDNSTEAGRKRSRGAEAATRKEALERLKAIRQGGLRNLSSSGGGYDIRIEQPIFDTVD
DDEYDAIVSRRREEARGFVVDDGEDGDLGYGDEGEEEDFTKPSGPDSTDESDDGGGFSGR
LRKKKAEKKKGKEQPQVKKVNPALKAAATITGEGRLSSMFTSSSFKKGKETDTVKCEGIL
DEVLAEVTPDDIDRERHRRRKQPSTVPVMFSRNKNVVSVTSSMAMKDSEPASDRVFMEKE
LMKEMKEEVVTESEVTPVHDSEKMELPGSGSVIEDGSNDVRQSEAKAESGVKEVFTLNAT
VDIKEKDSALSATAGWKEAMVKGGTENGAPLSSNCEGQTEFDLDADGSLRFYNLDAYEEA
FGASMGTIYLFGKVKMGDAFKSCCVVVKNIQRCVYAIPNESVFPSHELITLEQEVKDSKL
SPESFRGKLHEMASNLKNELSQQLLQLNVSSYSMALVKRNYAFERPDVPVGEQYVLKINY
PFKDPPLPEDLKGESFSAVLGSNTSALELFILKRKIMGPSWLKISNFSTNSPSQRVSWCK
FEVTVESPKVITVLVSEEKVVHPPAVVTAINLKTIVNEKQNISEIVSASVLCFHNAKIDV
PMPGPERKRSGILSHFTVVRNPEGTGYPIGWKKEVADRNSKNGCSVLSFENSERALLNRL
FLELNKLDSDVLVGHNISGFDLDVLLQRAQACKVLSSMWSKIGRLKRSSMPKLKGNTSYG
SGATLGIMSCIAGRLLCDTDLCSRDLLKQVSYSLTDLSKTQLNRDRKEISPNDIPKMFQS
SKTLVELIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGKTLQGARAQRIEYYLLH
TFHSKKYILPDKLSQRMKEIKSSKRRMNHGPEDHNVDELEADLALENDPSKGNKTKKGPA
YAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTIPRSEDGVPRLPSSQTPGIL
PKLMEHLVSIRKSVKLKMAKETGLKYWELDIRQQAIKLTANSMYGCLGFSNSRFYAKPLA
ELITLQGREILQRTVDLVQNHLNLEVIYGDTDSIMIHSGLDDIEEVKAIKTKVIQEVNKK
YRCLKIDCDGIYKRMLLLRKKKYAAVKLQFKDGKTCEDIERKGVDMVRRDWSLLSKEIGD
LCLSKILCGGSCEDVVEAIHSELMKIKEEMRNGKVALEKYVITKALTKSPEAYPDSKSQP
HVQVALRMRQRGYKEGFNAKDTVPYIICYEQGNTSSASSAGIAERARHPDEVKSEDSKWL
VDIDYYLAQQIHPVVSRLCAEIQGTSPERLAECLGLDPSKYRSRSNDATSSDPSASLLFA
TSDEERYKSCEPLALACPSCSAAFNCPSITSSVYASISKKSETEESDSTFWLKLQCPKCE
PEGSTGRISPAMIANQVKRQIDGFVSMYYKGIMMCDDESCKHTTRSPNFRLLGDRERGTV
CPNYPNCNGTLLRKYTEADLYKQLSYFCHILDTQCNLEKQMDVGVRIQVEKALTKIRPAV
QSAASMARSIRDRCAYGWLQLTDIAI
NT seq 4581 nt   +upstreamnt  +downstreamnt
atgtccggcgataactcgacggaggctggccgaaaacgaagccgaggcgcggaggcagcg
actaggaaggaagctctagagcggctgaaagcgattcggcaaggaggacttcggaatcta
tcatcttcaggtggcggctacgacatcaggatcgaacagcccatcttcgatacagtcgac
gacgacgagtacgatgcgatcgtgtcccggcggcgtgaggaggctcgcggattcgtagtc
gacgacggggaagacggagatctgggatacggcgacgaaggcgaggaggaggatttcacg
aagcccagtgggcctgattcgactgatgaatcggacgacggtggtggatttagcgggagg
ctgaggaagaagaaagctgagaagaagaaagggaaggagcagcctcaggttaagaaggtg
aatccggcgcttaaggcggcggctactatcacaggtgaagggagactctcttcgatgttc
acatcttcgagtttcaagaaggggaaggagactgatactgtaaagtgtgagggtattctt
gatgaggttttagctgaggtaactcctgatgatattgatagagagaggcataggagaagg
aaacaaccatccacggttccagttatgttctctaggaataaaaatgtggtttctgttacc
tcgagcatggcaatgaaggattcagaacctgcaagtgatcgtgttttcatggagaaggag
ttgatgaaagagatgaaagaagaagttgtgacagaatctgaagtcacccctgtgcatgat
tctgagaagatggagttacctggaagtggtagtgttattgaggatggatcaaacgatgtg
agacaaagtgaagcgaaggctgagtcaggagtgaaggaggtgtttactttgaatgcgaca
gttgatattaaagagaaggattcggctttaagcgccactgctggttggaaggaagcgatg
gtcaaaggtgggactgagaatggggctccacttagttctaattgcgaaggtcaaacggaa
tttgatttggatgctgatggttcacttcgtttttacaatcttgacgcttacgaggaggct
tttggggcgagtatgggcacaatatatttgtttgggaaggttaagatgggagatgcgttc
aagagttgctgtgtggtagttaagaatatccagagatgtgtttatgctatccccaatgaa
tccgtatttccttcccatgaactaatcacgctcgagcaagaggtgaaagactctaaactt
tctcctgaatccttccgggggaagttacatgaaatggcatcaaatttgaagaacgaactt
tctcagcaattgttacaactcaatgtttccagttatagcatggcacttgtcaagagaaac
tatgcatttgagaggcctgatgtgcctgttggcgaacaatatgtcttgaagataaattat
ccatttaaggatcctcctcttccagaagaccttaaaggggagtcttttagcgctgtcctt
ggctctaacaccagtgctttggagctttttatccttaaaaggaagataatgggaccgtct
tggctcaaaatttcaaacttttctaccaattcaccctctcaacgagtgagctggtgcaag
tttgaggttactgttgaatctcccaaggttatcactgttttagtttcggaggaaaaagtt
gttcatcctcctgctgtagttacagccataaatttaaagactatagtcaatgaaaagcag
aacatcagcgaaattgtttctgcgtctgttctctgctttcacaacgccaagattgatgtt
ccaatgccaggtccagaaaggaagaggtctggtattctgagtcatttcactgttgttagg
aatcctgaaggaaccggttacccaattggttggaaaaaagaagtggctgacagaaattca
aagaacggctgcagcgttttaagttttgaaaatagtgaaagagcattgctgaatcgactg
tttctggagctgaacaaattggacagtgatgttcttgtgggacataatatatcaggtttt
gatctggatgtccttctccaaagagcccaggcttgcaaagttttgagtagcatgtggtcc
aaaattggccgtctcaaacgctcttccatgcctaagcttaaagggaatactagttatggg
tccggagctacactagggatcatgtcttgcattgctggaagactcttgtgtgatacagat
ctatgttctcgtgacttgttgaagcaggtcagttattcgttaacagatctttcaaagaca
cagctaaaccgggacaggaaagagatatcgcctaatgacattcccaaaatgttccagtca
tctaaaacacttgtggaacttattgaatgcggtgagacagatgcgtggttatccatggag
ctcatgtttcatctaagtgttcttccactcactctccagctaactaacatcagtggcaat
ctttgggggaaaactcttcagggagccagggcgcagagaattgaatactacttgctacat
acattccactcgaaaaagtacatcctcccagacaaactttctcaacgtatgaaggaaata
aagtcatcaaaaagaagaatgaatcatggtccggaggatcacaatgttgatgaattggaa
gctgacctggctttggaaaatgatccgtccaagggaaacaaaacaaagaagggtccagcc
tacgctggtggactggtcttggagccaaagaaaggcttatatgacaaatatgttttgctt
ctcgatttcaatagtctttacccgtctattatacaggaatataatatctgtttcacgacc
ataccacgatcagaagacggagttcctcgtttaccgtcgagtcagacacctggaattctt
ccaaagttgatggaacatttggtcagtataaggaaaagcgtcaaactaaagatggcaaag
gaaacaggtcttaagtactgggagcttgacattaggcagcaggcaataaagctcacagcc
aatagtatgtatggatgtctgggtttttccaattcaagattctacgctaagcctttagca
gagctcataacactacagggaagggagatcctgcaaagaaccgtggatcttgtccagaat
catttaaacctagaggtgatttacggtgacacagattcaatcatgattcacagtggacta
gatgatatcgaagaggtgaaagccattaaaacaaaagtcatccaagaggtcaataagaag
tatagatgtctgaaaattgactgtgatggcatatataagaggatgcttcttcttagaaaa
aaaaaatatgctgccgtcaagttgcagttcaaggacgggaagacttgtgaggacattgaa
agaaaaggtgtggacatggttcgtcgagattggagcttactttccaaggaaattggagat
ttatgcttgtctaagatcttgtgtggagggtcatgtgaggatgttgttgaagcaattcat
agcgagcttatgaagataaaagaggaaatgagaaatgggaaagttgcacttgagaagtat
gtcatcaccaaggcattgactaagtcaccagaagcttatccagattccaaaagccaacca
cacgttcaagtcgcactcagaatgaggcaacgtggttataaagaaggtttcaatgctaag
gatactgtaccatatataatctgctatgaacagggtaatactagctctgccagctcagca
gggattgccgaacgtgctaggcatcctgatgaggtgaaatcagaagacagcaaatggttg
gttgacatagattactacttggcacagcagattcatcctgtggtgtctcgtttatgcgca
gagattcagggcacaagtcctgagaggttagccgagtgtttaggacttgacccatcaaag
tatcgaagcagatcaaacgatgctactagcagtgatccttctgcatccctcttgtttgct
acaagcgatgaagaaagatacaagagctgcgagccgttagcattagcatgccccagctgc
tctgctgctttcaattgtccatctattactagctcagtctatgcgtcgatcagtaagaaa
tctgaaacagaggaatctgattctacattctggcttaagctgcaatgcccgaaatgtgag
ccagaaggtagcacgggaagaatatcccctgcaatgatagctaaccaggtgaaaaggcag
atcgatgggtttgtatctatgtactacaaaggcataatgatgtgtgacgatgagtcttgc
aagcacacgactcgcagccccaacttccgtttgcttggtgaccgtgaacggggaacagtt
tgtccaaactatcctaattgtaatggaaccctcttaagaaagtacactgaagcagacttg
tacaagcagctgtcatacttttgccacatattagacacccagtgcaatctagaaaagcag
atggatgttggtgtcagaattcaagtagagaaagcattgacgaagataagacctgcggtt
cagtcagcagcatccatggctcgaagtatccgagaccggtgtgcgtacggatggctgcaa
ctcacagacatagccatttga

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