KEGG   Brassica rapa (field mustard): 103835882
Entry
103835882         CDS       T03449                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC31 homolog A
  KO
K14005  protein transport protein SEC31
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103835882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103835882
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:brp02044]
    103835882
Membrane trafficking [BR:brp04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    103835882
Secretion system [BR:brp02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   103835882
SSDB
Motif
Pfam: WD40 Sec16_C ANAPC4_WD40 SRA1 YqcI_YcgG Prp18
Other DBs
NCBI-GeneID: 103835882
NCBI-ProteinID: XP_018509257
Position
A08:complement(19888645..19895492)
AA seq 928 aa
MSCIKRVDRSAYVAMAPEAPFMAAGTMAGAVDLSFSSSSNLEIFELDFNSEDHEMKLLGQ
CSSSERFTRLAWGSYGSGSEETPYGLIAGGLVDGNIGLRNPITLIRSESNESAHVRYLSK
HKGPVRALEFNVISPNQLASGDDDGTICIWDLANTSEPSHVLKGSGSYTQGEISSVSWNR
EFKHVLASTSYNGTTVIWDVNNKKVITGFKNSESSDRFKGLISCSVLQWDPDNCNQIMIA
SDEDSSPSVKLLDIRYPQSPVRTFVGHHRGVIAMEWCPSDSLYLLTCARDNRTIFWNTKT
GQIVAELPTTNNSNFDVHWSPKIPGVVSASSADGNISIYNLEGCSRNGSGENNLIDAAPL
LTAPKWWKRPVSASFGFGGKLVSSNSKLPEASVVFLHNLATEQSLVNRITKFETEIVNGE
KTSLMSLCKKKSEETESEEEKETWSLLKIMLEEDGNAKTKLRTHLGFSLPSEDQEHYATY
SSENVEEEISDPLFDDAIQRSLIVGDYKEAVAHCLSANKMADALVIAHVGGTTLWESTLD
KYLKMSNAPYMKVFSAMVNNDLMSLVHTRPAKLWKETLALICTFAEGDEWTSLCDALASH
LLPSGFTLAATLCYICAGNVDKTVDIWLRSLEKDNAGESYSERVQDLMEKTIVLALATEN
KRFSASLHKLFESYAEILASQGLLATAIKFLKLLEPGDFSSELSILRERFSSVYQEPTQT
QPNPYNQQSFTPAPVTNAEPSRTTLVSLNPPPHQQRTMDFHSSTRYTNATYNPPPGLHLN
SKIHQTVVQQVELMVPAQRVAVQPPPAPVAPPPTVQTADTSNVPAHQKHIVATLTRLFKE
TSDTLGPAKKRDIEGISRKVGSLFAKLNNEDISKHAAEKLSLLCQALDKHDFVAALQIQA
HLASTEWDECNFWLLPLKQMIKGRQNVR
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgtcttgcataaagagagttgatagatccgcgtacgttgccatggcaccagaagctccg
ttcatggctgccggaacgatggccggagccgttgatctgtctttcagctcatcctccaac
ctcgagatctttgaactcgattttaactccgaagaccacgagatgaaactattaggtcag
tgctcaagctccgagaggtttactcgactcgcttggggaagttatggatccggatccgag
gaaactccctatggtctcatcgccggtggcctcgtcgacgggaatatcggtttacggaat
ccaatcactctgattcgttccgagtctaatgaaagtgcgcatgttagatacctttcaaaa
cataaagggccagttcgtgctcttgagtttaatgttatctccccaaaccaacttgcttcc
ggggatgatgatggcacgatttgcatttgggatttagcaaatacttcagagccttcccat
gtcctaaagggtagtggatcttatacgcaaggtgaaatctcctctgtttcatggaataga
gagtttaaacatgttttagcatcgacctcatataatgggactactgtgatatgggacgtg
aataacaagaaggttataacaggattcaaaaattccgaatcgagcgatagatttaaaggt
ctcattagctgctcagttttgcaatgggatcctgataattgtaatcagataatgattgca
tcagatgaagacagttcaccttctgtgaagcttttggacataaggtatccacaatcacct
gttcgcacatttgttggccaccacagaggtgtgattgcaatggagtggtgtccaagtgac
agcttgtatctacttacctgtgctagagacaaccgaactattttctggaacacaaagaca
ggacagattgtggctgagttaccaactacaaacaattcaaattttgatgttcattggtcc
ccaaagatacctggagttgtatcagcatcttcagctgatgggaatattagcatctataac
cttgagggttgcagccgcaatggtagtggagagaacaatcttattgatgcagctccttta
ttaacagcaccaaaatggtggaagcgcccggttagtgcatcttttggatttggaggaaag
cttgtgtcatctaactcaaagctccctgaggcttctgtggttttcttgcataaccttgcc
acagaacaaagtttggtgaatcgaataactaaatttgaaactgagatagtaaacggagag
aagacttcactaatgagtttgtgcaagaagaaatctgaagagaccgaatccgaggaggag
aaagaaacatggagcttgctgaaaatcatgcttgaagaggatgggaacgcaaagacgaag
ttgcgtacccatcttggctttagtttaccttctgaggatcaagagcattatgctacatat
tcttctgaaaacgtagaagaagaaatctctgatccattatttgatgatgccatccaacgt
tcattgattgtgggagattacaaggaagcagtagctcattgtttatctgcaaacaagatg
gctgatgctttagttattgctcacgttggtggtacaactttgtgggagagtactcttgat
aaatatctgaagatgagcaatgcaccttacatgaaggtgttttctgcaatggtgaacaat
gatttaatgagccttgttcatacaaggccagctaaattatggaaagaaactcttgctctc
atctgcacttttgcagaaggagatgaatggacaagcctctgtgatgctcttgcctcacat
ttgctgccttctggttttactttggctgcaactctgtgctacatttgcgccggaaatgtc
gacaaaacagtagacatatggttgaggagccttgaaaaagacaatgctggagaatcttat
tctgagcgtgttcaagatcttatggagaagactattgtccttgctttggcaaccgagaac
aagagattcagtgcctctttacacaaactctttgagagttatgctgagatactggccagc
caaggacttcttgcaacggctataaagttcttaaaacttcttgagcctggtgatttctca
tctgaactttcaatattgagggaacggttttcaagtgtttatcaggagccaactcagacg
cagccaaatccatataaccaacaatccttcactccagctccagtaaccaatgctgagcca
tcaagaactactttagtttctttaaatcctcctcctcatcaacagagaacaatggatttt
cattcatctactagatacacaaacgcaacatacaatccaccacctggtctacatcttaac
tctaagattcaccaaactgttgttcaacaagtggaactcatggttccagcacagcgggta
gctgtgcaaccaccccctgcacctgtagctccaccaccgactgttcagacagcggacact
tccaatgtaccagctcaccagaaacatatagtggctacattgacaaggctttttaaagag
acatcagacacattaggtcctgccaagaagcgtgatatagaaggtatctcaagaaaagta
ggatctctgtttgcgaaactcaataatgaggacatctcgaagcacgctgcagaaaaactc
tctctgctatgtcaagctctagacaaacatgactttgttgcagctttgcaaatacaggcg
catctggcgtccaccgaatgggatgaatgcaacttctggctcctaccacttaaacaaatg
ataaaaggaaggcaaaatgttcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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