KEGG   Brassica rapa (field mustard): 103842240
Entry
103842240         CDS       T03449                                 
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:brp00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    103842240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:brp04040]
    103842240
Ion channels [BR:brp04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   103842240
SSDB
Motif
Pfam: Ion_trans cNMP_binding DUF2786
Other DBs
NCBI-GeneID: 103842240
NCBI-ProteinID: XP_009117111
UniProt: A0A397YB48
Position
A09:complement(38859470..38865094)
AA seq 733 aa
MEFKRDNTVRFYGEEKQTLEATEKRQPLPMFKPSTTQFLKPELVIPKKTNKTRLFKLPRF
GGLKVFPENFEIERDKILDPGGDVVLQWNRVFLFWCLVALYVDPLFFFLSSVKNTGRSSC
MTTDLKLGIVITFFRTLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLR
SDFIVDLIACLPLPQIVSWFILPSIRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEII
KATGVVTTTAWAGAAYNLLQYMLASHILGAAWYLLSIERQATCWKAECHNELGPIRCVTD
FFDCGTVNREDRNNWQNVTVVFSNCDPSNKIRFTFGIFADALTKNVVSSPFLEKYLYCLW
FGLQQLSSYGQNLDTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWRLK
RRDTEEWMGHRQLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHLCLDL
VRRVPLFAQMDDQLLDAICERLVSSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGR
TGFFNSITLKPGEFCGEELLAWALLPKSKVNLPSSTRTVRALEEVEAFALQAEDLKFVAN
QFRRLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRRMLAKSLSLAESYSSYEEEEAL
AAAAAEEIMSQQEERQSSTPSRHHTSIGKPHFAATVLASRFAKNTRRASRKMKDVDVPML
PKPEEPDFSVDAD
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggagttcaaaagagacaatactgtcagattctatggagaagagaagcaaaccctagaa
gcaacagagaagcgtcagccattaccaatgttcaaaccatcaacaactcaatttctaaaa
ccagagttagtaatccccaaaaagactaacaaaacccgtctcttcaaactcccaagattc
ggtggactcaaagtgttcccggagaacttcgagatcgagagagacaagattctcgatcct
ggtggtgacgtagtgcttcaatggaacagagttttcctcttctggtgtctcgttgctctt
tacgtcgaccctttgttcttcttcctgtcttcagtcaaaaacactggtcgatcctcttgt
atgaccacagatttgaaactcggaatcgtcatcactttcttcagaacactagcggatctc
ttctatgtcttgcacattgtcatcaagttcagaacagcttacgtctctcgcacttcaaga
gtgtttggtcgtggagagcttgtgaaagatccgaagctgatagctagaagatacttgaga
tcagatttcatcgttgatctcatcgcttgcttgccccttcctcagattgttagttggttt
atcttgccatcaatcagaagctctcactcggaccatacaacaaatgcacttgtcctcatt
gttctagttcagtacattcctaggctttatcttattttccctctaagcgctgagattatc
aaagcgaccggagttgttacaaccaccgcttgggctggtgctgcttataaccttcttcag
tatatgctcgctagtcatattcttggtgcggcatggtatctactgtccatagagcggcaa
gcaacgtgttggaaagcagaatgtcataacgaattaggtccaatacgatgtgttactgat
ttctttgactgtggtacagtgaaccgagaggataggaataactggcagaatgtaactgtt
gtcttcagcaactgtgatccttcgaacaagatacggttcactttcggcattttcgcagat
gctctcaccaaaaatgtagtctcatctcccttcttggagaagtacttgtattgcctatgg
tttggtttgcagcaactaagttcttacggacagaatcttgacacaagtacatctgttcta
gagacaatgtttgccatcctcgtggctatctttggtctggttttgtttgctcttttaata
ggaaacatgcagacgtacttgcaatcgataacggtgaggctagaggagtggagactgaag
agaagagacacagaagaatggatgggacatcgtcaactacctcagaacttaagagaaaga
gtgagacgttttgttcagtacaaatggttagccactagaggagttgatgaagagaccatt
cttcattcactacctgctgatcttcgaagagacatccaacgacatctctgtctcgacctt
gttcgtcgtgtaccgctatttgcgcaaatggatgatcagttactagatgccatatgcgaa
cggttagtgtcatctctaagcacgcaagggaactacattgtacgtgaaggtgatccagtg
accgaaatgctcttcatcatccgtggaaagctcgaaagctcgacgactaatggaggcagg
acaggattcttcaactcaatcacactcaaaccaggagagttctgtggagaagagcttctc
gcttgggccttacttccaaaatcgaaagtaaacctaccttcctcgacaagaacggtgcga
gcgttagaagaagttgaagcctttgctttacaagcagaggatctcaagtttgtggctaac
cagttcagacgtttgcatagcaagaagctgcaacacacattccgttactactctcaccag
tggagaacttgggctgcttgcttcgtgcaagtggcttggagacggtataagaggagaatg
ctggctaagagtcttagcttggctgagtcatactcttcttatgaagaagaggaagctctt
gcagctgctgcggccgaggagataatgagtcaacaagaagagagacagagcagtactccg
tcgcgccatcatacttctattgggaaaccgcattttgctgcaacggtgcttgcttcgagg
tttgctaagaacacgaggagggcttctcgtaagatgaaggacgttgatgtaccgatgctt
cctaaaccggaagaaccggatttctctgtggatgcagattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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