KEGG   Brassica rapa (field mustard): 103842278
Entry
103842278         CDS       T03449                                 
Name
(RefSeq) nuclear pore complex protein NUP107
  KO
K14301  nuclear pore complex protein Nup107
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103842278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103842278
   03036 Chromosome and associated proteins [BR:brp03036]
    103842278
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103842278
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103842278
SSDB
Motif
Pfam: Nup84_Nup100
Other DBs
NCBI-GeneID: 103842278
NCBI-ProteinID: XP_009117153
UniProt: M4DYD6
Position
A01:complement(25512450..25523886)
AA seq 1069 aa
MEMDMDTSPSYFDPEVLSVRDQFRRYRKRHSTSPPHEEVSSLNVSENRLLYDGDHIHSPT
NTALLLENIKEEVDSFHTGLYEAEAVSAVSRRESGGDEGMFRRVESQSLKACKVENDELA
ESGDTTFALFASLFDSALQGLMPIPDLILRLEDSCRDVSQSIRYGSDIRHRVVEDKLMRQ
KAQLLLGEAASWSLLWNLYGKATEEVPQELITSPSTSHLEACQFVVNDHTAQLCLRIVLW
LEDLASKSLDLERKVRGSHVGTYLPNAGVWHHTQRYLKKAGSAADTVRHLDFDAPTREHA
RLLPDDKKQDESLLEDVWILLRAGRIEEACDLCRSAGQPWRAATLCPFSGMDMFPSVDAL
VKNGKNRTLQAIELESGFGNQLRLWKWASYCASEKIAEQDGGKHEVAVFANQCSNLNRIL
PICTDWESACWAMAKSWLDVQVDLELAQSKPGLTEKFRSCLDESPETMQNGRLASLGPED
WPLHVLNQQPRDLPALLQKLHSGEMVHDAVVRGCKEQHRQIQMTLMSGNISHLLDIIWSW
IAPLEDDQSNFRPHGDPHMIKFGAHVVLVLRYMLADEIKDREKLSNVGDLILHMYSMFLF
SKQHEELVGIYASQLARHRCIELFVHMMELRMHSSVHVKFKIFLSAMEYLPFSHVDDSQG
NFEEIVDRVLSRSREIKLAKYDPSVDVAEQHRQQSLQKAIAIQWLCFTPPSTIKDVKDVT
SKLLLRSLMHSNILFREFALIAMWRVPATPVGAHTLLSFLAEPLKQLSENPDTLEDYVSE
NLQEFQDWNEYYSCDAKYRNWLKFQLENAEVTELSEEENQKAVVAAKETLDSSLSLLLRK
DNPWLTFLEDDVFESEENMFLELHATAMLCLPSGECLRPDATVCAALMSALYASVTEEVV
LDRQLMVNVSISSRDSYCIEVVLRCLATEGDGLGPHNANDGGILSSVAAAAFKGELTRFQ
AGVTMDISRLDAWYSSKEGSLETPATYILRGLCRRCCLPELVLRSMQVSVCLMESGNPPE
DHDELIELVASDETGFISLFSQQQLQEFMLFEREYRLSQLELQEELSSS
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggaaatggatatggacacctctcccagctacttcgaccccgaggtcctcagcgtcaga
gatcaattccgtcgctaccggaagagacactctacatcgccgccgcatgaggaagtctcg
agtctgaatgttagtgagaataggttgctgtacgatggggatcacatccatagtccgacg
aacactgccttgcttcttgagaacattaaagaagaggttgatagctttcacaccggtctt
tacgaagctgaagcggtctctgctgtttccaggagggagagtggtggagatgagggtatg
tttcggagagtagagagtcagtcgctgaaggcttgcaaggttgagaatgatgagttggcg
gagagtggggatacgacctttgctctgtttgcttctttatttgattctgctcttcaagga
ctgatgccaattcctgatctaatattgagacttgaggattcatgcagggatgtttcacag
tcgattaggtatggatcagatataagacatcgggttgtggaggataaacttatgagacag
aaggctcagcttttgcttggcgaggctgcctcctggtcacttttatggaacctatatgga
aaagctacggaagaagttccgcaggaattgattacgtccccatcaacatctcatttggag
gcttgtcagtttgttgtaaacgaccatacagctcagctatgccttcggattgtcctgtgg
ctggaagatctagcttcaaaatcacttgatttggaaagaaaggtgcggggatctcatgtg
ggtacttatcttcctaacgctggagtgtggcatcatacacaaagatacctcaagaaagct
ggctctgccgctgacactgtacgccatttggattttgatgccccaactcgtgaacatgct
cgtcttcttcctgatgacaaaaaacaagatgaatctcttcttgaggatgtttggattttg
ttaagggctggaagaatagaggaggcatgtgatctctgcaggtccgctgggcagccatgg
agagctgcaactctatgccctttttctggaatggacatgtttccgtctgttgacgcactg
gtaaagaatgggaaaaataggactctccaggctattgaactggaaagtggctttggcaat
caactgcgtctttggaaatgggcttcgtactgtgcatcagagaaaattgcagagcaggat
ggcggcaaacatgaagttgctgtttttgcaaaccagtgcagcaacctgaaccgcatcttg
ccaatttgtactgattgggagtcagcttgctgggcgatggcaaaatcatggcttgatgtt
caagttgatctagagctcgcccaatcgaagccaggcttgacagaaaagtttagaagttgt
cttgatgaaagccctgaaactatgcaaaatggtcgtctggcttcacttgggccagaagat
tggccgctccacgttctaaaccagcaaccccgtgaccttcctgctcttcttcagaaactc
cattcaggggaaatggtacacgatgctgttgtcaggggatgcaaagagcagcaccggcaa
attcagatgacccttatgtcggggaatatctcgcatcttcttgatataatatggtcatgg
atcgcgcccttagaagatgatcaaagcaactttaggccccatggcgatcctcatatgata
aagttcggtgctcacgtggtgcttgttcttaggtatatgcttgccgatgaaatcaaggac
agggagaagctcagtaatgttggtgatcttattcttcatatgtattcgatgtttctattt
tcaaaacaacatgaagaactagtaggaatatatgcgtctcagcttgctcgtcatcgctgc
atcgaactttttgtacacatgatggagctaaggatgcatagcagcgtacatgtgaagttc
aaaatcttcctttccgctatggaatacttgccattctctcacgtggatgactcacaagga
aattttgaggaaatagttgacagggttttgtcaagatcccgggaaatcaaacttgcaaaa
tatgatccctccgttgatgttgcagagcagcatcgtcaacagagtcttcaaaaagccata
gccattcagtggctctgttttacacctccatctactataaaggatgtcaaggatgttact
tccaaattgctcctgcgatctttgatgcacagcaacatacttttccgagagtttgctttg
atcgccatgtggagggtgcctgcaactccggtgggtgcacacacgcttcttagttttctt
gctgaacctctgaagcaactctcagagaatccagatacactcgaggattatgtttccgag
aatttgcaggagttccaagactggaatgagtattattcctgtgacgcaaaatatcgcaac
tggctcaaattccaattagagaatgctgaagtcactgaactgtcagaagaggaaaatcaa
aaagctgtagtagcagccaaagagactttggattcttctttgtcactgctcctcagaaaa
gacaatccttggttgacatttctcgaagacgatgtattcgaatcagaagaaaatatgttc
cttgagttgcatgcaactgcgatgctctgtttgccttctggtgaatgtttgcgcccagat
gccactgtttgtgcggcattgatgagtgcgctttacgcttctgtcacagaggaagttgtt
ttagaccgtcagttaatggtaaatgtatcgatttcatcgagggacagctactgcatcgag
gttgtgcttcggtgtttagcaactgagggtgatggacttgggccacataatgcaaatgac
gggggtattttaagttcagttgcggcagctgcttttaaaggtgagcttacccggttccag
gcaggtgttacaatggatatatcacgcctagacgcttggtattcaagcaaagaaggctcg
cttgaaacacctgcaacttatattctccgtggtctctgtaggagatgctgtctcccagag
ctagttcttcgatctatgcaggtatctgtttgtctaatggagtcaggaaatccacctgaa
gatcacgatgagctgattgagctcgtggcttctgatgaaactggttttatctcattattc
agtcagcaacagttacaggagtttatgttgtttgagagagagtatcgtctgtcccagttg
gagctccaggaggaactttcatcatcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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