KEGG   Brassica rapa (field mustard): 103843248
Entry
103843248         CDS       T03449                                 
Name
(RefSeq) syntaxin-125
  KO
K08486  syntaxin 1B/2/3
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    103843248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103843248
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103843248
Membrane trafficking [BR:brp04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    103843248
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   103843248
  Exosomal proteins of other body fluids (saliva and urine)
   103843248
SSDB
Motif
Pfam: Syntaxin SNARE CCDC-167 DUF1664 Syntaxin-6_N Erp_C CD225 LMBR1 DUF6041 MCPsignal PNMA Syntaxin_2 Helo_like_N FapA
Other DBs
NCBI-GeneID: 103843248
NCBI-ProteinID: XP_009118197
UniProt: M4ESI0
Position
A09:complement(42849265..42850776)
AA seq 298 aa
MNDLFSNSFKRNQAQFGDVEAGQETMNLDKFFEDVENVKDDMKGIETLYKKLQDSNEECK
TVHNAKKVKELRAKMDGDVGQVLKRVKMIKQKLEALEKANANSRNVPGCGPGSSTDRTRS
SVVSGLGKKLKDLMDSFQGLRSRMNDEYKETVERRYFTITGEQADEQTIDNLIASGESEN
FLQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIE
SHVAKASSFVRRGTEQLQDAREYQKSSRKWTCYAIILFIVVFILLLIPALPHIMLMLK
NT seq 897 nt   +upstreamnt  +downstreamnt
atgaatgacttattctcaaattcattcaagaggaaccaggctcaatttggcgatgttgaa
gcaggtcaagaaacgatgaacctcgataaattcttcgaggatgtcgagaatgtgaaggat
gacatgaaaggaatcgagactctttataagaagcttcaagactctaacgaagaatgcaag
acggttcacaatgccaagaaggtgaaggagctacgagctaagatggatggagacgtaggt
caggtccttaagagggtcaaaatgatcaagcagaagctcgaagccctagagaaagctaac
gctaatagccgtaatgtccctggttgtgggcccggttcgtctacggataggactcggtcg
tctgtggttagcggtctcgggaagaagctcaaggacttgatggatagtttccagggtcta
cgttcaagaatgaacgatgagtacaaagaaaccgtagaacgcaggtatttcacaataaca
ggagaacaagctgacgagcaaacaattgataacttgattgcaagcggtgagagtgaaaat
tttctccaaaaagcgattcaagagcaaggaagaggtcagatcatggacactatatctgag
attcaagaaagacatgatgcagtgaaggagattgagaagaatctactcgagttgcaccaa
gttttcttggacatggcggctctagtggaagctcaagggcagcaactgaacaatatagag
agtcatgtggcaaaggcgagctcgtttgtgagaagagggactgagcagctccaagatgcg
agggagtaccaaaagagctcgaggaaatggacatgttacgccattattctctttatcgtt
gtctttatccttcttcttattcctgctctaccccatattatgctcatgttgaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (26)   

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