KEGG   Brassica rapa (field mustard): 103845391
Entry
103845391         CDS       T03449                                 
Name
(RefSeq) probable NOT transcription complex subunit VIP2
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103845391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103845391
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103845391
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     103845391
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 103845391
NCBI-ProteinID: XP_018510797
Position
A10:13209735..13211418
AA seq 184 aa
MSMLGNSYHTGGGPLSQNHAQSVNNMMLSDHSNDSSLFDINNDFSQRSSRPGSASGNQGQ
LGSASKMKTFLPYLDFKRASFNRLSYELLFYTFYSSNYCSSMPKDQAHLYAADELYDRGW
FYHKELRLWLFRDGEPLVRTAVYERGTYECLDPNSFKTVGKETFCCPVRAYGKETKLSAE
IDFK
NT seq 555 nt   +upstreamnt  +downstreamnt
atgtctatgctggggaactcgtatcacactggtggcggcccactttcgcagaaccatgct
cagtcagttaacaatatgatgctcagtgatcactctaacgacagttcactttttgacatc
aataacgatttctcccagcggtcaagtcgtcctggttccgctagtggcaatcaaggacaa
ctcggttccgcatccaaaatgaagactttcctgccctacctggattttaagcgagcaagc
ttcaacaggttatcctatgagttattgttctacacattttacagttctaactattgttcc
agtatgccaaaagaccaagcacatctatacgcagcagatgaactttatgatagaggttgg
ttttaccacaaggaactcagattatggttatttagagatggggaacctttggtcagaaca
gctgtatatgaaagaggaacatacgagtgccttgatccaaactcgttcaaaacagtcgga
aaggaaacattctgttgtccagtacgagcatatggaaaagagaccaagctttctgcagaa
attgactttaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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