KEGG   Brassica rapa (field mustard): 103845470
Entry
103845470         CDS       T03449                                 
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX2
  KO
K08681  pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00750  Vitamin B6 metabolism
brp01100  Metabolic pathways
brp01240  Biosynthesis of cofactors
Module
brp_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00750 Vitamin B6 metabolism
    103845470
Enzymes [BR:brp01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.3  Amine-lyases
    4.3.3.6  pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
     103845470
SSDB
Motif
Pfam: SNO GATase_3 BPL_N Peptidase_S51 DJ-1_PfpI GATase
Other DBs
NCBI-GeneID: 103845470
NCBI-ProteinID: XP_009120586
UniProt: A0A397XTD0
Position
A10:complement(13555655..13557553)
AA seq 252 aa
MTVGVLALQGSFNEHIAALRRLGVQGIEIRKAEQLLTVSSLIIPGGESTTMAKLAEYHNL
FPALREFVKTGKPVWGTCAGLIFLADRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEA
DISVPILTSKEGGPETFRGVFIRAPAVLDVGPDVEVLAHYPVPSNKVLYSSSTVQIQEED
ALPETNVIVAVKQRNLLATAFHPELTADTRWHSYFMKMAKEMEQGASSSSSGTIVSVGET
SEQAKPDIPIYQ
NT seq 759 nt   +upstreamnt  +downstreamnt
atgaccgtgggagtattagctttacaaggctctttcaacgagcacatcgcggctctgcgg
cggctcggcgtccaaggaatcgagattaggaaggcggagcagcttctcaccgtttcatct
ctcataatccccggcggcgagagcaccaccatggccaaactcgccgagtaccacaacctg
tttccggctctacgtgagtttgtcaagacagggaaacctgtatgggggacatgcgctggt
cttatcttcttggcagacagagccgttggtcagaaagagggaggtcaagaactagtaggt
ggccttgactgcaccgtgcataggaacttctttggcagccagattcaaagttttgaagct
gatatctctgtacctattctaacatctaaagaaggtgggccagagacgttccgaggagtc
ttcatacgtgctccagctgttctcgacgttggccctgatgtcgaagtcttagcgcattat
cccgtcccatcaaacaaggtcttgtattcaagctccactgtccaaatccaagaggaagat
gctcttcctgaaacgaacgtcattgttgctgtaaagcaaagaaacttgttagcaactgcg
tttcatcccgagttaaccgcagacacgcgttggcacagttatttcatgaagatggcgaaa
gagatggaacaaggagcttcttcaagcagtagtggaactattgtttctgttggagaaacc
agcgagcaagctaagcctgatattcctatatatcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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