KEGG   Brassica rapa (field mustard): 103846412
Entry
103846412         CDS       T03449                                 
Name
(RefSeq) chaperone protein ClpB3, chloroplastic
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:brp03110]
    103846412
Chaperones and folding catalysts [BR:brp03110]
 Heat shock proteins
  HSP100
   103846412
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 Clp_N ClpB_D2-small AAA AAA_5 Sigma54_activat AAA_16 AAA_22 nSTAND3 AAA_14 AAA_18 IstB_IS21 TniB Zeta_toxin AAA_7 RNA_helicase Mg_chelatase AAA_28 NACHT AAA_25 AAA_24 ResIII Torsin
Other DBs
NCBI-GeneID: 103846412
NCBI-ProteinID: XP_009121574
UniProt: M4CWV1
Position
A10:16512158..16516239
AA seq 973 aa
MATAKTTATAAFSGIVGGVGSDSRKVSSFSHLQPSVAFPAKPTSFKALKLKQSARLTRRL
QHQPFVVRCEASSNGRLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNG
LARRIFSKIGVDNTKVLEATDKFIQRQPKVYGEAAGSMLGRDLEGLFQRARQYKKDLGDS
YVSVEHLVLAFVDDKRFGKQLFRDFQISEKSLKTAIESIRGKQSVIDQDPEGKYEALEKY
GKDLTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIV
QGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQTILFIDEIHTVV
GAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVE
DTVSILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKME
ITSKPTALDELDRAVIKLEMERLSLTNDTDKASRERLNRIETELVLLKEKQAELTEQWEH
ERSVMSRLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLNEAEKELNEYL
SSGKSMFREEVLGSDIAEIVSKWTGIPVSKLQQSERDKLLHLEEELHRRVIGQNPAVTAV
AEAIQRSRAGLSDPGRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSEYMEK
HAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYSVILFDEIEKAHGDVFNVFLQILDDGRVT
DSQGRTVSFTNTVIIMTSNVGSQYILNNNADDEGSELGYETIKQRVMDAARSIFRPEFMN
RVDEYIVFQPLDREQINSIVRLQLARVQKRIADRKMKIEITDAAVDLLGSLGYDPNYGAR
PVKRVIQQNIENELAKGILRGDFKEEDGILIDTEVTAFSNGQLPQQKLTFKKIASETADA
EKEEEEAFSKQSN
NT seq 2922 nt   +upstreamnt  +downstreamnt
atggcgacggctaagacgactgcaacggcggcgtttagtggtatcgtcggcggcgtagga
tcagactcccgaaaggtttcctctttctctcacctccaaccttccgtggctttcccggcg
aagcccacttccttcaaagcactgaaactaaagcagagcgcgaggctcactcgaagactt
caacatcaaccgttcgtcgtccgatgcgaagcttcttctaacggaaggcttacacagcaa
gagttcacagagatggcgtggcaatcgatagtctcttcaccagacgtggctaaagagaac
aagcagcagatcgtggagacggagcatcttatgaaagctcttttggagcagaagaacggt
ttagctcgaaggatcttctctaagatcggtgtggataacactaaggttttggaagcgacg
gataagttcattcaacggcagccaaaggtgtatggagaagctgctggttcgatgttgggg
cgtgatttggaaggtttgtttcagagggcgagacagtataagaaagacttgggggactct
tatgtctctgtggagcatttggttcttgcttttgttgatgacaagcggtttgggaaacag
ctgtttagggattttcagatatctgagaagagtttgaaaactgctattgagtctattaga
gggaaacaatcagtcattgaccaagatccggaaggcaagtatgaggcgttggagaagtat
ggtaaagatttgacagcgatggcgagagaagggaagcttgatcctgtgattggaagagat
gatgagatccgtagatgcattcagattctctcaaggaggactaaaaataaccctgtgttg
atcggtgaacctggtgttggtaaaaccgcaatctcagaaggacttgctcagaggattgtg
caaggagatgtacctcaagcattgatgaacagaaagttgatatctcttgatatgggggca
cttattgctggagcaaagtatcgaggagagttcgaagatagactaaaggctgtacttaag
gaggtcacagactcagaaggccaaactattctgttcatcgatgagatacacacagttgtt
ggtgcaggtgctactaatggggcaatggatgctggtaatctactaaaaccaatgttgggt
cgaggcgagctaagatgcatcggcgcaacaacgcttgatgaatatagaaagtacatagag
aaagatccagccttggaacgcaggtttcaacaggtttacgttgatcaacctaccgtggaa
gacacggtttcgatcctccgtggtttgagagaaaggtacgaacttcatcacggagttcgc
atctcagacagtgctctagtggaagccgctattctctctgaccgttacatcagcggccgg
ttcctacctgacaaagcgattgacttggttgatgaagcagcagccaaactaaaaatggaa
atcacttcaaaaccaacagctctcgacgagcttgaccgcgcggtgatcaagctcgaaatg
gagagactctcactcaccaacgacacagacaaagcttcaagagagaggctaaaccggatc
gaaacggagttagtcttgctaaaggagaagcaagccgagttaaccgagcagtgggagcac
gagaggtccgtcatgtcccgtctccagtccatcaaagaggagatagatcgtgtcaacctc
gagatccagcaagcggagcgcgagtacgatctaaaccgcgcagcagagctcaaatacgga
agcctaaactctctccagcgtcagctaaacgaagctgagaaggagctcaacgagtactta
agctctggcaagtctatgtttagagaagaggtgttaggcagcgacatagcagagatcgtg
agcaaatggactggcatccctgtctccaagctccaacagtccgagagagataagcttctg
cacttggaagaggagctgcatagacgagttataggtcagaaccctgcagttacggccgta
gccgaagcgatccaacggtctagagccggcctgtcggatccaggccgtccgatagcttcc
ttcatgttcatgggaccgacaggagtcggcaaaaccgagctggccaaggcgctagcttct
tacctcttcaacacggaggaagctctggtgaggatcgacatgagcgagtacatggagaaa
cacgcggtctcgaggctcatcggagctcctcccggatacgtgggatacgaggaaggaggg
cagttgactgaagtggttaggaggaggccttactcggtcatcctcttcgacgagatcgag
aaggctcatggagatgtgttcaacgtgtttctccagatcttggacgatgggagggttact
gactctcagggacgtacggtgagtttcaccaatacggttattatcatgacctcgaacgtt
ggctcgcagtatatactgaacaacaacgcggatgatgaggggagtgagctcggttatgag
acgattaagcagagagtgatggatgctgcgagatcgatctttcgtcctgagtttatgaat
agggttgatgagtatattgttttccagcctcttgaccgtgagcagatcaacagcatcgtc
cggttacagctggctcgtgtgcagaagcggattgcggataggaaaatgaagatagagatc
acagatgcggcggtggatcttctcgggagcctcgggtatgatcctaactacggagctaga
cctgttaagcgtgtgatacagcagaacattgagaacgagctggcgaaaggtatcttgaga
ggagatttcaaggaagaagatggcattctgatcgatacagaggtcacagcgttctccaat
ggtcagttacctcagcaaaagctcacattcaaaaagattgcgtcagaaacggcagatgct
gagaaggaggaagaagaagctttctcaaaacagagcaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (34)   

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