KEGG   Brassica rapa (field mustard): 103850585
Entry
103850585         CDS       T03449                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:brp03009]
    103850585
Enzymes [BR:brp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103850585
Ribosome biogenesis [BR:brp03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    103850585
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII
Other DBs
NCBI-GeneID: 103850585
NCBI-ProteinID: XP_009125601
UniProt: M4EIZ2
Position
A02:864127..867447
AA seq 594 aa
MDSSSSNTNKALTETRFSDLEPPLSEDIIEALERSGFEFCTPVQAATIPLLCRHKDVAVD
AATGSGKTLAFVLPLIEILRRSTSYPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLPN
VNSVLLVGGREVKSDMSTIEEGGCNLLIGTPGRLSDIMERMEILDFRNLEILILDEADRL
LEMGFQKQVNSIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSESSSQ
QLTNSKVPSGLHLEYLVCEADKKSSQLVDLLVENEKKKLIVYFMTCASVDYWGLVLSKIP
ALKSISLIPIHGDMKQNARDKALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQD
PNMFNHRVGRTARLGKEGRAIVFLLPEEEDYVEFMRRRGVPCQEKKLSEEASDVIPIIRS
LAMKDRAVLEKGLKAFVSFVRGYKEHHCSYIFRWKSLEIGKLAMGYGLLYLPSMSEVKQH
RLSSEGFTPVTDVKFEDIKFKDKSREKQRKQNMQARKEKRQQEKKEKGKKNSKKAVVAAA
TDSNKRKLTGKQRQTIQTAEDEEEMARDYRLLKKLKKGSIKEDDFAKLTGADDF
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggattcatcatcgtcgaacacaaacaaagcgttaacggagacgcgtttctccgacctc
gaacctccgctctccgaagacatcatcgaggccctcgaacggtccggtttcgagttctgc
actccggttcaggccgcgacgatccctttgctctgccgccacaaggatgtcgccgtcgac
gccgccaccggctcgggaaaaaccctagctttcgtcttacccttaatagagattctccgt
cgctccacctcttaccctcccaagcctcaccaggttatgggggtgattatatcgccaacg
agagagctatcaacgcagatatataacgtggcacagccatttgtctccactttgccgaat
gtgaactctgtgctgcttgttggaggccgtgaggtgaagtccgacatgagcactatagaa
gaaggaggatgcaatctcttgattggcactcctggaaggctctctgacataatggaacga
atggagattcttgatttcagaaaccttgagattcttatcttagatgaagcagataggctt
ttggagatgggattccagaagcaggtgaacagcattatatctcgcttgccgaagcagcgt
aggactggtctcttttcagctacacagaccgaaggtgttgaggagcttgccaaggctggg
cttaggaaccctgtgagagttgaagttcgagctgagtcaaagtctgaatcatcatctcag
caattaacaaactccaaagtaccttctggtcttcaccttgagtatttggtatgcgaagca
gataagaagtcgtcacaactagtggatctcctcgtcgagaatgaaaagaaaaagcttata
gtatactttatgacctgtgcttctgttgattactggggactagtactttcgaaaatccct
gctctgaagtccatttctttgatccctatccatggagatatgaagcagaatgcaagagac
aaggcgttagcttcgtttactgaagcatcaagcggtgtccttttgtgcactgatgtggct
gcacgtggactagatattcccgggattgattacgtagttcagtatgatcctccacaagac
cctaatatgttcaaccatagggttggcagaactgcaagattgggaaaagaaggaagagcc
atcgtttttttactgcctgaggaagaagactatgtagagtttatgcggagaagaggggtc
ccttgtcaagagaaaaaattatctgaggaagcatctgatgtcatccctataatacggtca
ctagccatgaaggacagggcagtgttggagaagggactaaaggcgtttgtttcctttgtc
cgtggttacaaggagcatcactgctcttacattttcagatggaaaagcctagaaatagga
aagttagcaatgggatatggactcttgtatcttccttcaatgtctgaagtcaaacaacac
agactctccagtgagggtttcacacctgttacagacgtcaagtttgaggacatcaagttc
aaggacaaatctagggagaagcaaaggaagcagaacatgcaagcaaggaaagagaaacgg
caacaagagaaaaaggagaaaggcaagaagaactcgaaaaaggcggttgttgctgctgcc
acagattctaacaaaaggaagttgacaggaaagcagagacaaaccatccaaacagcggaa
gatgaagaggagatggctcgagattatcggttacttaagaaactcaagaaaggttctatt
aaagaagatgattttgctaaacttacaggagctgatgacttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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