KEGG   Brassica rapa (field mustard): 103851531
Entry
103851531         CDS       T03449                                 
Name
(RefSeq) protein GAMETOPHYTE DEFECTIVE 1 isoform X1
  KO
K03539  ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103851531
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:brp03009]
    103851531
   03016 Transfer RNA biogenesis [BR:brp03016]
    103851531
   03029 Mitochondrial biogenesis [BR:brp03029]
    103851531
Enzymes [BR:brp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     103851531
Ribosome biogenesis [BR:brp03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     103851531
Transfer RNA biogenesis [BR:brp03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    103851531
Mitochondrial biogenesis [BR:brp03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    103851531
SSDB
Motif
Pfam: RNase_P_p30 FRG2
Other DBs
NCBI-GeneID: 103851531
NCBI-ProteinID: XP_009126631
Position
A02:complement(5162724..5165395)
AA seq 673 aa
MAFFDLNVPYSYPSQSGGKEAAVAVANKLRVKLATKAMELGYVGIAHNHSIGGVMTEKDS
CTIPLLTLGSLIKAAPRLSSSVAFHRDLLGVPRSTPFRQYTRATVKLESKAQCLGLNSGN
PVLKSYDIVAVRPMNQYAFDQACTKAEVDIISIDFSNLPFRLMHPTVKAAIKRGVYFEIK
YSDLLKDAEKRRQVISNAKLLVDWTKGKNLIISSGSPSVTELRGPNDVINLMSLLGLSTE
RARAAVSKNCRNMIAKILKKKRFHKEAVKVELLSSSDTFSLEQTLSGDFMKWDPISSGEG
DMLLEDLAKAFDATTRAVANKSSKAIDVTSDRKGLPSHGFRLTDILGSEPSTQETADKMI
DDAPVHCKSQVSDACMADSDIPSSVDNRLENKTISQIEISEDDNKVEPTTIVPLRKCSTS
QRQGLSVQDQASASVTLIRCTKSDAASDVNMQTELESEDKSVSPSKIGHVVPQSLVENLK
METILVHDQVSLDEVSKEEAISGHAKIEHSVSIDGVEMEIDGSLEANHDQYMEVTVEDQK
HETGDSNINLPNLSSSEATDLLRNSDNSLSPEAAGQDHDQVPSLDSSEAELGEEPAVPYN
NTIEISMEDKKESGREIETNQQVHVQSERNNVRNSGKTRAKRSRTRLTQLQPLKPFLLHR
FKQISKRRKHRRG
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggccttcttcgacctaaacgtaccgtacagctacccgtcccaatcaggcgggaaggaa
gccgccgtcgccgtcgcaaacaaactccgcgtaaagctcgccacgaaagccatggagcta
ggctacgtcggaatcgcgcataaccattcgatcggcggcgtaatgacggagaaggactct
tgcacgatccctcttctcactctcggatctctcatcaaagccgctccgcgattatcatcc
tccgtcgcgttccatcgcgacttgctcggcgtccctcgatccactccgtttcggcagtac
acgcgcgccaccgtcaagctagagagcaaggctcagtgcctggggttgaactccgggaat
ccggttctgaagagctatgatatcgttgccgttaggccgatgaatcagtacgcgttcgat
caagcttgtacgaaagctgaggttgatatcatctcgattgatttctcgaatttgccgttt
cggttgatgcatcccacggttaaagctgctattaagcgaggagtttactttgagatcaag
tactctgatctcttaaaggatgctgagaagagaagacaagttatatccaatgctaagtta
ctggtggattggactaaagggaagaatctgattatatcgagtggttcaccttcagtcact
gaacttagaggtccaaacgatgttatcaacctcatgtctttgcttggactctctactgaa
agagccagagctgcagtttcaaaaaactgtaggaatatgatagccaagattttaaagaag
aagcggtttcacaaagaagctgttaaggttgagttgctttcttctagtgatacctttagc
ctcgaacagactctgtctggtgatttcatgaaatgggatcccatctcaagtggtgaaggt
gacatgctcttggaagatctcgcgaaggcttttgatgccaccacacgtgctgtggcgaat
aaatcctctaaggcgattgatgtcacctctgatcgtaaaggcttgccatcacatggtttc
cggctcactgatattctaggaagtgaaccttcgactcaggaaactgcagataagatgatt
gacgacgcaccggtgcactgtaagagtcaagtttctgatgcatgtatggctgattcagat
ataccttcatctgttgataatcgtctggaaaacaaaaccattagccaaattgagatatct
gaagatgacaacaaagtggaacctacaactattgtccccctgaggaaatgcagtaccagc
cagagacaggggctttcggtgcaagatcaagcatctgcatccgttacactgataagatgc
acaaagtctgatgcagcttctgatgtcaacatgcagactgagttggagtcggaagataaa
tctgtatcgccatcaaaaatcggccacgtggtcccacaaagtcttgttgaaaatttaaag
atggaaactatccttgttcatgatcaggtctcactggacgaagtaagcaaagaagaagct
atttctggtcatgctaagattgagcactctgtatcaattgatggcgttgagatggaaatc
gatggttctttggaagcaaatcatgaccagtacatggaggtgacagtggaagaccagaag
catgaaacaggtgacagtaatataaatcttcctaacttatcctcctctgaggctactgat
ttgctaagaaattcagacaactctctcagtccagaggcggctggacaagaccatgaccaa
gtaccaagcttagactccagtgaggcggagcttggggaagaaccagcagttccatacaac
aacaccattgaaatatcaatggaagacaagaaagaaagcgggagagaaattgaaactaat
caacaagtccatgtccagtctgaaagaaacaatgtcagaaactcagggaagacacgagct
aagaggagtagaactcgattaacgcagctacaacctttgaagccttttctacttcatcgt
ttcaaacaaatcagtaaaagacgaaaacatagaagaggttga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system