KEGG   Brassica rapa (field mustard): 103857205
Entry
103857205         CDS       T03449                                 
Name
(RefSeq) chaperone protein ClpD, chloroplastic
Organism
brp  Brassica rapa (field mustard)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small Clp_N AAA AAA_5 AAA_16 AAA_22 Sigma54_activat nSTAND3 AAA_14 AAA_7 IstB_IS21 RuvB_N AAA_18 NACHT AAA_25 Zeta_toxin Torsin AAA_33 T2SSE AAA_28
Other DBs
NCBI-GeneID: 103857205
NCBI-ProteinID: XP_009132633
UniProt: M4EK76
Position
A03:complement(7004506..7009161)
AA seq 943 aa
MEVLSTSSPLTLHTRRLPSSSSSPVTSFAASSLSSFSSSYLGISLSNRRTIHRLSTTPTN
SRRFPRKKRNKLTPISAVFERFTERAIRAIIFSQKEAKSLGKDMVYPQHLLLGLIAEDRD
PQGFLGSGVTVDKAREAVSSIWDKANSDDSGLSESSSSSSYSRSTDMPFSISTKRVFEAA
VEYSRTLECQYIAPEHIAVGLFTVDDGSAGKVLKRLGANMNLLTAAALTRLKGEIAKDGR
EPPSSKDASPNGRVGGPGSAGRTKEKSVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQ
ILCRRTKNNPILLGEAGVGKTAIAEGLAISIAEANAPGFLLTKRIMSLDIGLLMAGAKER
GELESRVTALISEVKKSGKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGEL
QCIASTTLDEFRSQFEKDKALARRFQPVLIDEPSEEDAVKILIGLREKYEAHHNCKYTME
AIDAAVYLSSRYIADRFLPDKAIDLIDEAGSRARIQAFRKKKEDAICILSKPPDDYWQEI
RTVQAMHEVVLSSRPNQEDGNNIVDESTELVEESSLPPAAGNDEPIEVGPDDIAAVASAW
SGIPVQQITADERMLLMGLEDELRNRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLF
CGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLT
EAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSS
AIAKGRQRSIGFILDDDEEEASYSGMKALVVEELKNYFRPELLNRIDEIVIFRQLEQAQM
MEILNLMLQDLKSRLVALGVGLEVSEPVKELICRQGYDPAYGARPLRRTVTEIVEDPLSE
AFLAGSFKPGDTAFVVLDDTGNPSVRTKPDSHNVRVTDKTSIA
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggaagtcttatctacttcctctcctctaacccttcacacccgccgtctcccctcttct
tcatcttctcccgtcacctccttcgccgcttcttccctctcttccttctcctcctcctac
ctcggaatctccctctccaaccgccgtacgatccaccgcctctccacaactccaacgaac
tcccgccgattcccccgcaagaaacgaaacaaactcaccccgatctcagccgttttcgag
cggttcaccgaacgagccatcagagccatcatcttctcccagaaggaagctaaatcgttg
gggaaagacatggtctaccctcagcaccttctcctcggcctcatcgccgaggatcgcgac
cctcaggggttcctcggatccggagtcaccgtagacaaggcgcgtgaagctgtctcgagt
atctgggacaaagctaactccgacgattcgggcttatcggagtcgtcgtcgtcgagttcg
tactctaggtccacggatatgccgttctcgatcagcacgaagcgggtgttcgaagctgcg
gtggagtattcgaggactttggagtgtcagtatattgctcccgagcatatagctgtcgga
ctctttaccgttgatgacggtagcgctgggaaagtcctcaagagattgggagcaaatatg
aatttgctcacagcagcagcactgaccagacttaaaggagagattgccaaagacggaaga
gaaccaccttcttctaaagacgcttcccctaatggcagagttggtggtcctggaagtgct
ggaagaactaaagagaaaagtgtactggaacagttctgtgtggatcttacggcacgagct
agcgaggggcttattgatcctgttattggcagggagaaggaagttcaaagagtcatccag
atactttgccgcagaaccaaaaacaaccctattcttctaggtgaggctggtgttgggaag
accgccatcgctgaaggactagcgattagtattgcggaagcaaatgctcctggatttctc
ttgacaaaacgcatcatgtccctggatataggactgcttatggctggtgcaaaggaaaga
ggggaactggaatcacgagtcactgctttgataagcgaagtgaaaaaatcaggtaaggtg
attctcttcatagatgaagtgcacactcttattggatctggcacagtcggaagaggcaac
aaagggtctggtcttgacattgctaatctcttgaaaccaccacttggaaggggtgaactt
cagtgcattgcatccacaacccttgacgaattcaggagtcagtttgagaaggacaaagcc
ctagcaaggaggttccagccagtgttgattgacgagccaagcgaggaagacgcggtgaag
attttgataggccttcgtgaaaaatacgaagcccatcacaactgcaaatacactatggaa
gctatagatgctgcagtgtacctttcatcgcgatacatcgcggataggtttcttccagat
aaagctatcgatcttattgacgaggcgggaagcagagctcgcatccaagcttttagaaag
aaaaaggaggatgcaatctgtatcctttcgaagccaccggatgattactggcaagagatc
agaactgttcaggccatgcacgaagtggttctatcaagcaggccgaaccaggaagatggt
aataacattgtagacgagtctactgaactagttgaggagtcttctctaccacctgcagca
ggcaacgatgagcctatagaggtggggcctgatgatattgcagcggttgcatcggcttgg
tctggaattccagttcagcagatcaccgcagatgagagaatgcttcttatgggtctagaa
gatgagctcagaaacagagtcgttggtcaagacgaggccgtagctgccatatctagagct
gtgaagaggtcacgtgttggcttaaaagatcctgaccgtcctattgccgctatgctgttc
tgtggacctactggagttggaaaaaccgaactcactaaagctctagcagctaattatttt
ggatcggaggaatctatgctgagattggacatgagtgagtacatggagcgtcatacggtg
agcaaattgataggctctcctcccggatatgttggttttgaagaaggtggaatgctcact
gaagctatcaggagacgtccttttacagtggttttattcgatgagatagagaaagcccat
cctgatattttcaacattcttctccagctcttcgaagacggccatcttaccgattcacag
ggaaggagagtgtctttcaagaacgcactgatcataatgacctctaatgtcggatcatca
gccattgccaagggaagacagaggtcaatcggttttatcctcgatgatgacgaagaggaa
gcttcttactctggtatgaaagctttggtagtcgaagaactcaagaactacttccgtcca
gagttgttgaaccgtattgacgaaatcgtcatcttcagacagctcgagcaggcgcagatg
atggagattttgaatctgatgttacaagacttgaagtcgaggcttgtggcacttggagtc
ggtttagaggtgtctgaacctgtcaaggagcttatatgcagacaaggctatgatccggcc
tacggtgcacgaccactacgtagaaccgtcacggagattgtggaagatccactcagcgaa
gcctttcttgctgggagctttaagcccggtgacacggcttttgtggttctcgatgataca
ggaaacccttcggttcggaccaaaccagattctcacaatgtacgagttacagacaagaca
tcgatcgcatag

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Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (29)   

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