KEGG   Brassica rapa (field mustard): 103857645
Entry
103857645         CDS       T03449                                 
Name
(RefSeq) ABC transporter B family member 1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:brp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    103857645
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:brp02000]
    103857645
   04147 Exosome [BR:brp04147]
    103857645
   04090 CD molecules [BR:brp04090]
    103857645
Enzymes [BR:brp01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     103857645
Transporters [BR:brp02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    103857645
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103857645
CD molecules [BR:brp04090]
 Proteins
  103857645
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 ABC_ATPase Zeta_toxin AAA_22 RsgA_GTPase AAA_29 AAA_15 AAA_21 AAA_5 nSTAND1 AAA_30 SbcC_Walker_B AAA_25 APS_kinase DUF87 Rad17 PBP_N ECH_2
Other DBs
NCBI-GeneID: 103857645
NCBI-ProteinID: NP_001288986
UniProt: Q2V606
Position
A03:9078949..9084602
AA seq 1300 aa
MQGLELLPEPSSNSNSNSRNPETELQEHPPEMGNGGGTPPPPPPATVEEPKKAEIRGVAF
KELFRFADGLDYVLMTIGSVGAFVHGCSLPLFLRFFADLVNSFGSNANNVDKMMQEVLKY
ALYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQDIQFFDTEVRTSDVVS
AINTDAVMVQDAISEKLGNFIHYMALVTIAVVPLIAVIGGIHTTTLSKLSNKSQESLSQA
GNIVEQTVVQIRVVMAFVGESRASQAYSSALKTAQKLGYKTGFAKGMGLGATYFVVFCCY
ALLLWYGGYLVRHHLTNGGLAIATMFAVMIGGLGLGQSVPSMAAFAKAKVAAAKIFRIID
HKPTIERNSESGVELESVTGLVELKNVDFSYPSRPDVKILNDFTLSVPAGKTIALVGSSG
SGKSTVVSLIERFYDPTSGQVLLDGHDLKTLKLKWLRQQIGLVSQEPALFATSIKENILL
GRPDADQVEVEEAARVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPA
ILLLDEATSALDSESEKLVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIG
THDELFAKGENGIYSKLIKMQEAAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRS
PYSRRLSDFSTTDFSLSVEASSYPNYRHDKLPFKDQANSFWRLAKMNSPEWKYALVGSVG
SVICGSLSAFFAYVLSAVLSIYYNPDHNYMIKQIDKYCYLLIGLSSAALIFNTLQHSFWD
IVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQ
NTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKGTQLAG
EAIANVRTVAAFNSEAKIVRLYTANLEPPLKRCFWKGQIAGSGYGVAQFCLYASYALGLW
YASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGQAMRSVFELLDRKTEI
EPDDLDTTPVPDRLRGEVELKHIDFSYPSRPDIQVFRDLSLRARAGKTLALVGPSGCGKS
SVISLIQRFYEPSSGRVLIDGKDIRKYNLKAIRKHIAIVPQEPCLFGTTIYENIAYGHEC
ATEAEIIQAATLASAHKFISALPDGYKTYVGERGVQLSGGQKQRIAIARALVRKAEIMLL
DEATSALDAESERSVQEALDQACSGRTSIVVAHRLSTIRNAHVIAVIDDGKVVEQGSHSH
LLKNYPDGIYARMIQLQRFTHTQVIGMTSGSSSRVKEDDA
NT seq 3903 nt   +upstreamnt  +downstreamnt
atgcaaggacttgagcttctccctgaaccttcctcaaatagtaacagcaactcaagaaac
ccagaaacagagctccaagaacatccgccggagatgggaaacggcggtggtactcctcct
cctcctcctccggcaacagttgaggagcctaaaaaagcagagattcgtggagttgcgttc
aaagagcttttcagattcgcagatgggttagattatgtactgatgacaattggctctgtt
ggtgctttcgtccacggctgctctttgcctctgttcctcagattcttcgccgatctcgtg
aactccttcggttctaacgctaataacgtcgacaagatgatgcaagaagttctcaagtat
gcgctttactttcttgtcgttggtgctgcaatctgggcttcctcctgggcagagatttcg
tgttggatgtggactggagagagacaaacaacgaagatgaggataaagtacttagaagct
gctttaaaccaagacattcagttcttcgacacagaggttcgaacttcagatgttgtctcc
gccattaacaccgacgctgttatggttcaagacgccatcagcgagaaattgggtaacttc
atccattacatggcgttggtgactatcgcggtggttccgttgatagctgtgatcggagga
atccacaccacaactctctctaagctctctaacaagagtcaggagtctctttcacaagct
ggtaatatcgtcgaacagacagtggtacagatcagggtagtaatggcttttgtcggagag
tcaagagcctctcaagcttactcatcagctttgaagacagctcagaaactcggttacaaa
acaggtttcgctaaaggaatgggacttggcgcgacttacttcgtcgtcttctgttgctac
gctctcttgctctggtacggtggctatctcgtccgccaccatttgaccaacggtggtctc
gctatagccaccatgttcgccgtcatgatcggtggcttggggttgggacaatcagtaccg
agcatggctgcgtttgcgaaagctaaagttgctgctgcaaagatctttagaatcattgat
cacaagccaacgatagagcgtaacagcgagtccggcgtggagctagagtctgtcacgggt
ctcgtcgagcttaaaaacgttgacttttcgtacccgtcaagaccagatgttaagatcctt
aacgacttcacactctctgtacccgccgggaagactatagctttggtcggaagcagtggt
tcgggcaaaagcactgtcgtttcgcttatcgagcggttttacgacccgacctcaggacaa
gttttactagatgggcacgacctgaagacactgaagctcaaatggttaagacaacagatc
ggtcttgtgagccaagaaccagccttgttcgccacttccatcaaagagaatatactctta
ggccgtccagacgcagatcaagtcgaggtagaagaagcagctcgagtcgcaaatgctcat
tccttcatcatcaaactacctgatggcttcgacacacaggttggggagagaggactgcag
ctttcaggtggacagaagcaaagaatagcgatagcaagagccatgttaaagaacccggcg
atacttttactagatgaagccacaagcgctttggattctgaatcagagaagctagtgcaa
gaagctttggaccgtttcatgataggaaggacgactctaatcatcgctcaccgtctctcc
accatccgcaaagctgaccttgtagctgtgcttcagcaaggaagtgtctccgagattggt
actcacgacgagcttttcgccaagggagagaatggtatctactctaagcttattaaaatg
caagaggcagctcatgaaaccgctatgaacaacgcaagaaagagtagtgctagaccgtct
agtgctagaaactcggttagctcaccgataatagctcggaactcttcttatggaaggtca
ccgtactcacggagactctccgacttctcaactactgacttcagcctctccgtcgaagct
tcttcatacccaaactaccgacacgataagctacccttcaaggaccaagccaactccttc
tggcggctagcgaaaatgaactctccggagtggaagtacgctctcgtcggttctgtaggc
tcagtcatctgcggctcactcagcgccttctttgcatacgtcctcagcgcggtcctaagc
atctactacaacccggaccacaattacatgatcaaacagattgataaatactgttacctc
ttgatcggtctctcttctgcggctctcatcttcaacacgctccagcattctttctgggac
attgtgggggagaatctcaccaagagggtccgtgagaagatgcttaccgctgtgctcaag
aacgagatggcttggtttgatcaagaggagaatgagagcgcgagaatctcggcgaggttg
gctcttgatgctaataacgtgagatcagctataggagataggatctcggtcattgtgcag
aacacagcgttgatgcttgttgcttgcactgctgggtttgttctgcaatggagactcgct
ctcgtcttggtcgcagtcttccctgtagttgttgctgcaaccgtcttacagaaaatgttc
atgactggattctctggagaccttgaagcagcgcatgccaagggaacacagctcgctggt
gaagccatagctaatgtcagaacagtcgcagcctttaactcagaagcaaagattgttcgt
ctctacactgcaaacctcgaaccaccgttgaaacgctgcttctggaaaggacagatagct
ggaagtggctacggtgtagctcagttctgtctctacgcatcttacgctctagggctatgg
tacgcgtcgtggcttgtgaaacacggaatctccgacttctccaaaaccataagagtcttc
atggttctgatggtctcagctaatggcgcagcagagacgctcacattagctcctgatttc
atcaaaggtggtcaggcaatgaggtcggttttcgaacttcttgatcgaaaaaccgagatc
gaaccggatgatcttgacaccacgccggttccagaccggttacgcggcgaagtggagctg
aaacacattgatttctcttacccttctagaccagacattcaagttttccgtgaccttagc
cttcgcgctagagctggcaagactttggcccttgtcggtccgagcgggtgcggtaaaagc
tcagtcatctccctgatccagagattctacgaaccgtcctcaggccgagtcttgatagac
ggtaaagacataaggaagtacaatttgaaggccataaggaaacacatagccatagtccct
caagagccttgcttgttcggcacgacaatatacgaaaacatcgcatacggacacgaatgc
gcgacagaagcagagatcatacaagccgcaacgctagccagcgcgcacaagttcatatcc
gcgttgcctgatggctacaagacttatgtcggagagagaggcgttcagctgtcgggagga
cagaaacagaggatagcgatagcacgtgccttggtgaggaaggcagagatcatgctgctc
gatgaggccacaagtgctcttgatgcagagtcagagaggtcggtgcaagaggcgttggac
caggcttgttctggtagaacatctattgtcgtggctcataggttgtctacaatcaggaac
gcacacgtgatcgcggtgattgatgatggtaaagttgtggaacaaggatcgcattcgcat
cttctcaagaactatcccgatggaatctacgcgaggatgatacagttgcagaggtttacg
catactcaggtgattggtatgacgtcagggtcgagttctagggttaaggaagatgatgct
tag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (21)   
   Pfam (21)   
All databases (40)   

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