KEGG   Brassica rapa (field mustard): 103858981
Entry
103858981         CDS       T03449                                 
Name
(RefSeq) tyrosine--tRNA ligase, chloroplastic/mitochondrial isoform X1
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    103858981
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:brp01007]
    103858981
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:brp03016]
    103858981
   03029 Mitochondrial biogenesis [BR:brp03029]
    103858981
Enzymes [BR:brp01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     103858981
Amino acid related enzymes [BR:brp01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   103858981
Transfer RNA biogenesis [BR:brp03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    103858981
 Prokaryotic type
    103858981
Mitochondrial biogenesis [BR:brp03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    103858981
SSDB
Motif
Pfam: tRNA-synt_1b S4 TyrRSs_C S4_2
Other DBs
NCBI-GeneID: 103858981
NCBI-ProteinID: XP_009134703
Position
A03:complement(15511282..15514238)
AA seq 520 aa
MHISSTSFSTEERSRQYSKLMAYATGVTLASRTIFPFCSRTLLPRLRVVSMLESSSPSTF
FKRVQVHQLFSTSTAPLFSSVKCSTSSLETAASRPNVVTILEERGLLESITSENLRSACS
DPNVAPLKVYCGFDPTAESLHLGNLLGIIVLSWFQRCGHQAVGLIGGATGRVGDPSGKSL
ERPELDALTLEKNITGIKNILVKILGGNASSYVIFNNYDWWKDMTMLDFLKNVGRFARVG
PMMAKESVKKRLESEQGMSYTEFSYQLLQGYDFVHLLDKEGVNVQIGGSDQWGNITAGTD
LIRKILQTEEAAYGLTFPLLLKNDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDVDV
IRFLKTLTFLSLDEIKTLEDEMRKPGYVPNTVQMKLAEEVTRFVHGEEGLKEAMKATEAL
RPGAETKLDWNLIERIAEDIPTCSLPVDRVAGVSIVDVSVSAGLFESKSAARRMLKQGGV
YMNNERVDDENKRVEEGDIVEGKGLVLSSGKKNKVVIRIS
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgcacataagttctaccagcttctctactgaagaaaggtcacggcaatatagtaaactt
atggcatatgcaacaggagtgacccttgcttcaaggactatcttccctttttgttccaga
accttgttacctcgcttgcgtgtggtttctatgcttgaatcatcctccccctccactttc
ttcaaaagggtccaagttcatcagcttttctccacttctacagctcctctcttctcctct
gttaagtgttctacttcctctcttgagacagctgcttcacgcccaaatgtagttactata
ctcgaagaaagaggactcctggagtcaataacaagcgagaatctcaggtctgcttgttct
gatcccaacgtagctcctctaaaagtctactgcgggtttgatccaactgctgagagttta
cacttgggtaacctccttggtatcattgtcctttcttggtttcaaagatgtggacaccaa
gccgttggtttgatcggtggtgccactggacgcgttggtgacccgtctggcaaaagccta
gagagacctgagcttgacgcccttacattggagaaaaacataaccgggattaaaaacatc
ctcgtcaagattcttggtggcaatgctagctcttatgtgattttcaataactatgactgg
tggaaagatatgacgatgctagactttctgaaaaacgttggtcggtttgctagagttgga
ccaatgatggcgaaggagagtgtgaagaagaggctagaatcagagcaaggtatgagctac
acagagttcagttatcagttactgcaagggtatgactttgttcacttgttggacaaggaa
ggggttaatgttcagataggtggtagtgatcagtggggtaacatcacagctggaactgac
ttgatccgtaagattctccaaaccgaagaagctgcttacgggctaacgttccctctccta
ctgaaaaacgatgggacaaaatttggaaagtcagaagatggagccatctggctatctcct
tcaatgttatcgccttataagttctatcagtacttcttctcagttccagacgttgatgtg
atacgcttcttgaagactctaacctttctgagtttggatgagatcaagacgttggaagat
gagatgaggaagcctgggtatgtccctaacaccgtgcagatgaagctcgctgaagaagta
accagatttgtacatggtgaagagggtttgaaggaagcaatgaaagcaacagaggcttta
agaccaggagctgagacaaagcttgattggaacttgattgagagaattgcagaggatata
ccgacttgctcactgcctgttgatagagtcgctggtgtttcgattgtggatgtgtctgtt
tctgcagggttgtttgagagcaagtctgcagctaggaggatgttgaagcaaggtggagtt
tatatgaacaatgagagagttgatgatgagaataagagagttgaagagggagacattgtt
gaagggaaaggtcttgttctctcttcaggcaagaagaacaaagtagtcatcagaatttcc
taa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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