KEGG   Brassica rapa (field mustard): 103859538
Entry
103859538         CDS       T03449                                 
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103859538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103859538
   03110 Chaperones and folding catalysts [BR:brp03110]
    103859538
   03029 Mitochondrial biogenesis [BR:brp03029]
    103859538
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103859538
Enzymes [BR:brp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     103859538
Messenger RNA biogenesis [BR:brp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     103859538
Chaperones and folding catalysts [BR:brp03110]
 Heat shock proteins
  HSP60 / Chaperonin
   103859538
Mitochondrial biogenesis [BR:brp03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    103859538
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103859538
  Exosomal proteins of other body fluids (saliva and urine)
   103859538
  Exosomal proteins of breast cancer cells
   103859538
  Exosomal proteins of colorectal cancer cells
   103859538
  Exosomal proteins of bladder cancer cells
   103859538
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 103859538
NCBI-ProteinID: XP_009135334
UniProt: M4CBE4
Position
A03:complement(17845845..17849537)
AA seq 572 aa
MYRVLSKLSSSIGSSTSRKLVSGRIISSRNYVAKDISFGVGARAAMLQGVSEVAEAVKVT
MGPKGRNVIIESSYGAPKITKDGVTVAKSISFESNAKNMGAELVKQVANATNKVAGDGTT
CATVLTQAILTEGCKSVAAGVNVMDLRSGINMAIDAVVSDLKSRAVMISTPEEITQVATI
SANGEREIGELIARAMEKVGKEGVITVADGNTLENELEVVEGMKLARGYISPYFITDEKT
QKCELENPIILIHEKKVSDMNSLLKVLEAAVKSSRPLLVVAEDVESDALAMLILNKHHAG
LKVCAIKAPGFGDNRKASLDDLAVLTGAEVISEERGLTLDKIRPELLGTAKKVTISRDDT
LILHGGGDKKLIEERCEELRSANEKSTSTFDKEKTQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIIPGGGVALLYATKALDNLETQNEDQRRGVQIVQNALKAP
ALTIAANAGYDGSLVVGKLLEQDDCNFGFDASKGSYVDMVKAGIIDPVKVIKTALTDAAS
VSLLLTTTEASVLVKAEEKTQKHVPDMAGMGM
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgtacagagtgctgtcaaagttatcttcttcaattggctcctctacttccaggaaactg
gtttctggaaggataataagcagcagaaactatgtggctaaggacatcagttttggggtt
ggggctcgtgcagctatgttgcaaggtgtatccgaggttgctgaagctgtcaaggtcact
atgggcccaaagggaaggaatgtgataattgagagcagctatggcgcaccaaagatcaca
aaggatggtgtcaccgtcgccaaaagcatttcatttgagtcaaatgctaagaacatgggt
gctgagctcgttaaacaggtcgctaatgccactaacaaggttgccggagatggtaccacg
tgtgcgactgttttgactcaggctatactcaccgaaggttgcaagtcggtggctgctggt
gtgaatgtgatggatctgcgtagtggcataaacatggccattgatgctgttgtctctgat
ttgaaaagtagagctgttatgattagcacccctgaagagatcacacaggttgctactata
tctgcaaacggcgagcgtgagattggggaattaattgcaagagccatggagaaagttgga
aaggaaggagttatcactgtcgctgatgggaacactttagagaacgagctagaagtagtg
gaaggaatgaagctagccagaggttacatctctccttacttcatcacagatgagaagact
cagaaatgcgagctcgagaatcccatcatcctcattcacgagaagaaggtttcagacatg
aactcgttgttgaaagttctagaggcagctgtgaaaagtagcagaccacttcttgttgta
gcagaagatgtagagagtgatgcattagctatgctgattctcaacaagcatcatgctggg
cttaaggtgtgcgctatcaaggctccaggttttggtgacaacaggaaagcaagcttagat
gatcttgcagttcttactggtgcagaggttatctctgaggagcgtggtctaactcttgac
aaaattcgtcctgaattgcttggaactgcaaagaaagtcactatctctcgtgatgatact
ctcatcctccacggtggtggcgacaagaagctgatagaagaaagatgtgaagagttaagg
tcagcgaacgagaagagcacatccacatttgataaagagaaaacgcaagaacgactctca
aaactatcaggtggtgttgcagtcttcaaggtgggaggagcaagtgaagctgaagttgga
gaaagaaaagacagagtcactgatgctttgaatgctacaagagcagccgtagaagaaggc
atcatacctggtggtggtgtggctctgttatacgctacaaaggctttagacaaccttgaa
actcaaaacgaggatcaaagaagaggtgttcagatagttcagaatgctctcaaggctcct
gcattgacaatagctgcaaatgctggttacgatggttctttagtggttggcaaattatta
gagcaagacgattgcaacttcggtttcgatgcttctaaaggttcgtatgttgatatggtg
aaagctggaatcatagacccggttaaggttatcaaaaccgccttaaccgatgctgctagc
gtttctttgctattgacaacaacagaggcatcagtgcttgtgaaggcagaggagaaaact
cagaagcatgtccctgatatggctggcatgggcatgtga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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