KEGG T03449: 103863052

Brassica rapa (field mustard): 103863052

Entry

103863052         CDS       T03449

Name

(RefSeq) chromatin-remodeling ATPase INO80

K11665

chromatin-remodeling ATPase INO80 [EC:5.6.2.-]

Organism

brp Brassica rapa (field mustard)

Pathway

brp03082

ATP-dependent chromatin remodeling

Brite

KEGG Orthology (KO) [BR:brp00001]
09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103863052
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brp03036]
    103863052
Chromosome and associated proteins [BR:brp03036]
Eukaryotic type
  Chromatin remodeling factors
   INO80 complex
    103863052
   INO80 complex (yeast)
    103863052

SSDB

Motif

Pfam:

SNF2-rel_dom DBINO Helicase_C ResIII DEAD HDA2-3

Other DBs

NCBI-GeneID:

103863052

NCBI-ProteinID:

XP_009139040

Position

A04:complement(2071774..2079171)

AA seq 1482 aa
MDRSRRQPSSDSRYATLFNLEPLRNFTIPRHEDEIENYDETRSNQVANYGNGVKKRKRWI
EEAGDDDDDHYNQHVTEEHYRSMLEEHVQRLKSSSRESQGNHTSLMRKSNVGSYRGNGQR
GRFYDADAISQRRGSYRGSAITPKIAYEPSYLDIGNGVVYKIPPSYDKLVASLNLPSFSD
LRVEDFYLRGALDLRSLEEVMASVKRSGVRSRNGMGEPRPQYESLQARVKALSASNSNPN
FSLKVSDDAMNSVIPEGAAGSTARTILSEGGVLQVHYVKVLEKGDTYEIVERSLPKKLKV
KNDPAVIEKTERDKIRKVWINIVRRDIPKHHRVFTNFYRKQSIDAKRFADGCQREVRYKV
ARSYKLPRSAPIRTRKISRDMLLFWKRFDKQMAEERKKQEKEAAEALKREQELREAQRQQ
QRLNFLIKQTELYSHFMQNKTDSKPSESLSIADENLVDEKLREPAAAEPSEVEDPEEAKM
KADALKATQEAVSKQKKITDAFDTESMKLRQTSDMDGPPNDFSVSGSGNIDLHNPSTMPA
TSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEK
NIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGF
HILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKNSTSIRWKTLLSFNCRNRLLLTGTPI
QNNMAELWALLHFIMPMLFDSHEQFNEWFSRGIENHAEHGGTLNEHQLNRLHAILKPFML
RRLKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGHFNDKKLLNLM
NIVIQLRKVCNHPELFERNEGSSYLYFGVMSNSLLPPPFGELEDVHYSGGKNPITYKIPK
LLQKEMLQSSETFCSSIRRGLSRESFLKHFNIYSPESIFRSIFSSESSVDQAVSGSGAFG
FSRLMDLSPSEVGYLALCSAMERLLFSILKWERQFLDEILDSVMEFVDDDLSGGNITRGK
TRAVTRMLLMPSKLETSLLKGKRGTRPTCHSFESLVVSHQDRLLSNIKLLHSTYTFIPKA
RAPPVSVHCSDRNFAYGTTEEMHQPWLKRLLIGFARTSEANGPRKPNNLPHPLIQEIDSE
LPVVQPALQLTHRVFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMT
KMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQQRSDIFVFLLSTRAGGLGINLTA
ADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQL
VMTGGHVQGDDVFGTADVVSLLMDDADAAQLEQKFRELPLQVRDRQKKKQPVKCIRIDAE
GDAALEELEDAAERRDKEQEPSQEPEKTKPSNKKRKAAASTPKPRVPPKANEEGDAPLQP
QRTKRVKRQTKSVNESLEPVFSASVTAANGEVNPSSSNPDAN

NT seq 4449 nt +upstreamnt +downstreamnt
atggatcgttcaagaaggcaacccagtagtgactcgcgttacgcaactctcttcaatctc
gagccgttgaggaacttcacgattcctagacatgaagatgagattgagaattatgatgaa
actagaagcaatcaagttgctaactacggcaacggcgttaagaagagaaagcggtggata
gaagaagctggtgatgatgatgatgaccattacaatcaacatgttactgaggagcattac
agatcaatgcttgaggagcatgtgcaaagactcaaaagtagctccagggagtctcagggg
aatcacacatctctgatgcggaagagcaatgtgggcagttacagaggtaatggtcaacgt
gggagattctatgacgcggatgcgatctcacaaagacgaggaagctatcgtggttcagct
attacccctaaaatagcatatgagccttcgtatttggatattggtaatggtgttgtctac
aaaatccctccaagttatgacaagctggtggcgtcattgaacttacctagcttttcagat
cttcgtgtggaagatttttacttgagaggagctctggatctgagatcattagaagaagtg
atggctagcgttaaaaggtctggagttagaagccgtaatggaatgggtgagcctcgacct
cagtatgaatctcttcaagcgagagtgaaggccttgtcagcttcaaactccaacccaaac
tttagcctcaaggtgtcagacgatgcaatgaactctgtcattccagaaggagctgctgga
agcacggcacggactattctatcagagggtggtgttttacaggtccattacgtgaaggtt
ctggagaaaggggatacatatgagattgttgaacgaagtctaccaaagaagctgaaggtg
aagaatgatcctgcagtcattgagaagacagaaagggacaagattagaaaagtctggatc
aacattgtcagaagagatataccaaaacaccatagagtcttcactaacttttatcggaaa
caatcaattgatgccaagagatttgctgatggttgccaaagagaggtgagatataaggtg
gctagatcatacaaattgccaaggagtgcaccaattcgcaccaggaagatatccagagac
atgctgctattctggaagcggtttgacaagcagatggcagaagagaggaaaaaacaggaa
aaagaagctgcagaggcattaaaacgcgaacaggagcttcgagaggcacaaaggcagcaa
cagaggctcaattttcttatcaaacagactgaactttatagtcacttcatgcaaaacaaa
accgattcaaagccttcagaatccttgtcgatagcagatgaaaatctggttgacgaaaag
ctccgagaacctgcagcagcagaaccttctgaggtggaggatcctgaagaggctaaaatg
aaggcagatgccctgaaagctacccaagaggcagtatctaagcagaaaaaaataacagat
gcgtttgacactgaatctatgaagctacggcaaacttctgacatggacggaccaccaaat
gatttctcggtctctggctcgggcaatatagacttgcacaacccatctacaatgcctgct
acatcaacagttcagactccagagttgtttaaaggaactctaaaagaataccaaatgaaa
ggccttcagtggctagtcaattgttatgagcagggtctgaatggcattcttgctgatgaa
atgggcttgggtaagactattcaagcaatggcgttcttggcacatttggctgaggagaaa
aacatctggggtccatttctggttgttgcccctgcttctgttcttaacaattgggctgat
gaaattagtcgtttctgtcctgacttgaaaactcttccatactggggaggattacaagaa
cggaccattttaagaaagaatatcaatcccaagcgtatgtaccgaagggatgctggtttt
catattttaattaccagctatcagctactagtaaccgatgaaaagtattttcgccgggtc
aaatggcaatatatggtgctagatgaggcccaagcaatcaaaaattccaccagtataaga
tggaagacccttcttagtttcaactgtcggaaccgattgcttctgactggtactccaatt
cagaataacatggcagaactatgggccctgctgcacttcatcatgccaatgttgtttgac
agccatgaacaatttaacgagtggttctcaagaggaatcgagaatcatgctgaacatgga
ggcactttgaacgagcaccagcttaacagactgcatgcaatattaaagccattcatgcta
cgacgtctcaaaaaggatgtggtttctgagctaaccacaaagacagaagttactgtacac
tgcaagctcagttctcgacagcaagctttttatcaagctattaagaacaagatttctctg
gctgagttgtttgacagcaaccgtgggcatttcaatgacaagaaattattgaacttgatg
aatattgtcattcaacttagaaaggtttgtaaccatccagagttgtttgaaaggaatgaa
gggagctcatatctctactttggagtgatgtccaattctcttttgccgcctccctttggt
gagctagaggatgtacattattcaggtggtaaaaatcccataacatacaagatacctaaa
ctcctgcagaaagaaatgctccaaagctctgaaacattttgttcttccatcaggcggggc
ttatcaagagaatccttcctgaagcattttaatatatattcacctgaaagtatttttagg
tcaatattctcatctgagagtagcgtagatcaagcagttagtggaagtggagcatttggc
ttttcacgcttgatggatttatcaccatcagaagttggatatctagctttgtgttccgcc
atggaaagactattgttctctatattgaaatgggagcggcaattcttagatgaaatatta
gactctgttatggagttcgtcgatgatgatcttagtggaggtaacatcacaagaggtaaa
accagagctgtcacaagaatgctgctgatgccatcaaaacttgaaacgagtttgctgaaa
gggaaacgaggcacaaggcctacatgtcactcatttgaatctctagtggtttctcatcag
gataggctactttcaaatatcaaactcctacattctacatatacttttatcccaaaagcc
agagctccaccggtaagcgttcattgctcggatagaaactttgcatacggaactacagag
gagatgcatcagccatggcttaagagactattaatcggctttgcacgaacttcagaagct
aatggaccaaggaagccgaacaaccttccacatcctttgatccaagaaattgattcagaa
cttccagttgtacaacctgcgcttcagttgacacaccgagtatttggttcttgtcctcca
atgcaaagttttgaccctgcaaagttgctaacggactctgggaagctgcagacgcttgat
atattgttgaagcggcttcgagctgggaatcacagggtgctcctctttgcacaaatgaca
aagatgctgaacattctggaggattacatgaactatagaaagtataagtatctcaggctt
gatggatcctccaccatcatggatcgccgagatatggttagggattttcagcagaggagc
gatatttttgtattcttgctgagcaccagagctggaggacttggtatcaacttgacggct
gctgacacagtcattttctatgaaagtgattggaatcccaccttggatttacaagctatg
gacagagctcatcgtcttggtcagacaaaagatgtaactgtttatcggctcatctgcaag
gagacggtggaagagaaaatattgcacagggcaagtcagaagaatacagttcaacagctt
gttatgacagggggtcatgttcagggtgatgatgtgtttggaactgcggatgtggtatcg
ttgcttatggatgatgcagatgcagcacaactggagcagaaattcagagaactaccatta
caggtaagggacaggcagaagaaaaaacagccagtgaaatgtatcagaatagatgctgaa
ggagatgcagctttggaagagttggaagatgctgctgaacgacgggataaggaacaggaa
ccttcccaagaaccggagaagacgaaacccagtaacaaaaagagaaaagctgctgcttca
actccgaaacctagagtccctcccaaagcaaatgaagaaggagatgctcctcttcagcct
cagagaacaaaaagggtaaagagacaaacaaagagcgtaaacgagagtcttgaacctgtc
ttctccgcatcagttaccgcagcaaatggagaagtcaatccaagtagctctaatccagat
gctaactaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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