KEGG   Brassica rapa (field mustard): 103863786
Entry
103863786         CDS       T03449                                 
Name
(RefSeq) ubiquitin receptor RAD23d
  KO
K10839  UV excision repair protein RAD23
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03420  Nucleotide excision repair
brp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103863786
  09124 Replication and repair
   03420 Nucleotide excision repair
    103863786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:brp03051]
    103863786
   03400 DNA repair and recombination proteins [BR:brp03400]
    103863786
Proteasome [BR:brp03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    103863786
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      103863786
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD Dsc3_N TECR_N UBA_3 CUE Ubiquitin_5 Ubiquitin_4 SAP130_C
Other DBs
NCBI-GeneID: 103863786
NCBI-ProteinID: XP_009139789
UniProt: M4EHB9
Position
A04:8745654..8748593
AA seq 378 aa
MKIFVKTLKGTNFEIEVNPADTISDTKRRIETHQGAQYPAAQQMLIHQGKVLKDETTLEE
NNVVENSFIVIMLSKAKVSSSGASTASAPAPAPQAQPAQTVATPQVAAPTVSVPEPTSVA
ATVAAPSAAAASTQTDVYGQAASNLVAGNTLESTVQQILDMGGGSWDRDTVVRALRAAFN
NPERAVEYLYSGIPAQAEIPPAPQAPATGGQAANPLAQEAAPVPATGGPNANPLDLFPQG
MPAADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQAD
FLRLINEPVEGEENAMEQLEAAMPQAVTVTPEEREAIERLEAMGFDRAMVLEVFFACNKN
EELAANYLLDHMHEFEEQ
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgaagatcttcgtcaagactctcaaggggaccaacttcgagatcgaagtgaatccggcg
gatacgatctctgatactaagagaagaatagaaactcaccaaggtgcgcaatacccggcg
gctcagcagatgctaatccaccaaggaaaagttctcaaggatgagactacattggaagag
aacaacgttgttgagaacagtttcattgtcatcatgttgtccaaggccaaggtttcttca
agcggggcatcaactgcatctgcgcctgcaccagcacctcaggctcagcctgcacagaca
gtagctacacctcaggtggctgctccaactgtctcagttccagagcctacaagtgtagct
gcaaccgttgcagcacctagtgctgctgctgcttcgacgcaaacagatgtgtatggtcaa
gcagcgtcaaaccttgttgctgggaatactctggagtccactgttcagcaaattcttgac
atgggtggaggtagttgggaccgtgacactgttgtccgagccctgagagccgcctttaac
aaccctgaaagggctgttgaatatctctactctggaatccctgctcaagctgaaatcccg
ccagcccctcaagccccagctactggtggacaggcagcaaatcctctagcacaagaagct
gctccagttcctgcaactggtggtccaaacgcaaatccattagacctgttccctcagggc
atgcccgctgcagacgctggtgctggagctggtaatcttgatttcctgcgaaacagtcaa
cagttccaagccctgcgagctatggtacaagcgaacccacaaattctgcagcctatgctt
caggagctcggtaaacaaaacccgcagcttgtgcgtctaattcaagagcaccaggccgac
ttcctacgcttgataaatgaaccggtcgagggagaagagaacgccatggaacagttggaa
gcagccatgccacaagctgttaccgtcacacctgaagagcgtgaagccattgaacggctg
gaagcgatggggtttgatcgtgcgatggtcttggaggtgttctttgcgtgcaacaagaat
gaagaacttgcagctaactatcttctagatcacatgcacgagtttgaagaacaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

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