KEGG   Brassica rapa (field mustard): 103866259
Entry
103866259         CDS       T03449                                 
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103866259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brp03021]
    103866259
   03036 Chromosome and associated proteins [BR:brp03036]
    103866259
Transcription machinery [BR:brp03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103866259
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     103866259
  Chromatin remodeling factors
   BAF complex
    103866259
   PBAF complex
    103866259
   GBAF(ncBAF) complex
    103866259
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII QLQ DEAD Viral_Hsp90 AAA_14 HDA2-3 Bromodomain
Other DBs
NCBI-GeneID: 103866259
NCBI-ProteinID: XP_009142395
Position
A04:21528540..21537404
AA seq 2161 aa
MQSGGSGGGPARNPGMGPAGRTNSTSSAASPTSSSSSVQQQQHLASRQQQQQGRNSEAND
GMFAYHPGGVQGMMGGGNFGSSSGSMQQPQQPRRLFDSPQQQQGSSQEGQQSFNPMQQAY
LQFALQAQQQKAQQQARMGMMGSSKDQDARMGMLNMQGAMPMQASNQAQGSSSNPSAEQF
ARGERQMESGHETKPHPQQVGTGQLMPGNITRPMQAPQGPQGVNNMGTNQLAFSQQWQAM
QAWARERNIDLSHPANASQMSHILQGRMVAQQKANEGNVASQSPSIPVSSQPSSSSGVPG
ENSPRPNSAGDISGQSGSGKARHAIPTSSFASTSSPRMMNPAANPFSAQGRDNPPYPRHL
VQPTNGMPSGNSMQTSANETHVLDHNASTNKGLGSAEHLQMQQPRQMNAPSPKAVISDAG
LLNKSSLQSGQGIKQEQQRSGFTKQQLHVLKAQILAFRRLKKGEGSLPQELFKSIAPPPL
EVQTPLQIFPVRVHGQDRSSDKTVENQARSLESGKESQTAASSNGQIFAKEEDNVGGTEV
PLATGHSQLFQNLGKEAASTAAATKEEQQADVFPVKSDQGADASTQQTPRSDSNADKGKA
VASDGGQSNVPPQANSPQQPKDTAPARKYHGPLFDFPFFTRKHDTYGSATANANNNLTLA
YDIKDLVCEEGAEFFNKKRTDSLNKINGLLATNLERKRIRPDLVLRLQIEEKKLRLSALQ
SRVRDEVDRQQQDIMSMPDRPYRKFVRLCERQRLEMNRQVLANQKAVREKQLKTIFQWRK
KLLEAHWSIRDARTARNRGVAKYHEKMLREFSKRPDDGRNKRMEALKNNDVERYREMLLE
QQTNIPGDAAERYNVLSSFLTQTEDYLHKLGGKITATKNQQEVEEAANAAAIAARLQGLS
EEEVRAAAACAREEVLIRNRFVEMNAPKDNSSVNKYYTLAHAVNEVVVRQPSMLQAGTLR
DYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVL
VNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVD
WKYIVIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDN
RKAFHDWFAQPFQREGPSHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPP
KVSVVLRCRMSSIQSAVYDWIKATGTLRVDPDDEKLKAQKNPIYQAKIYKTLNNRCMELR
KTCNHPLLNYPYFNDLSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEE
YLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIY
DPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKISSHQKEDELRSGGSMDLEDDLAG
KDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDDERYQETV
HDVPSLHEVNRMIARSEEEVELFDQMDEEFDWTEEMTCHEQVPKWLRASTREVNTTVADL
SKKPSKNMLSSSNLIVQTGGPGGERKRGRPKSKKINYKEIEDDIGLFSEESSEEVNVDSG
NEEEGDIGQSDDDELTGALGDQQTNNGESDGENPVAGYDYPPRSGSYKKVPPQDDAGSSE
SSPESHRSKEMASPVSSKKFGSLSALDTRPGSVSKRLVDDLEDGEIGASGDSHIDLQRSY
DRDEGGGEQVLQPTIKRKRSIRLRPRQTAEGTDVSDVPAAQPLQVDRSYRSKLRTVADSH
GSRQDQSDSSSRLRSLPAKKVANTSKLHVSSPKSGRLNATQLPVEDNDEAARETWDGTSP
IGSSNAGARMSHTIQKRCKTVISKLQRRIDKEGQQIVPMLTNLWKRIQNGYAAGGVNNLL
ELREIDQRVERLEYVGVMELASDVQYMLRGAMQFYGFSHEVRSEARKVHNLFFDLLKMSF
PDTDFREARNALSFSGPSPTLVSTSSPRGAVGISQGKRPKPVDEEEPEEPSSPQRRQQRE
NSRIRVQIPQKDPKLGGTSSHTDESPILAHPGELVICKKKRKDREKSAPRTRTAGSSSPV
SPQAMIGRGLRSPVSGSVTRETRLAQATHPNNSGAAGDSVGWANPVKRLRTDSGKRRPSH
L
NT seq 6486 nt   +upstreamnt  +downstreamnt
atgcaatctggaggcagtggcggaggccccgcccggaatccgggcatgggtccggcgggt
cggaccaactccacatcatccgctgcgtctccgacttcttcatcttcatccgtgcaacag
caacagcatctggcgtctaggcagcagcagcagcaggggagaaactcagaggcaaatgat
ggcatgtttgcgtatcatcctgggggagttcaggggatgatggggggtggtaactttggt
tcttcgtctggctctatgcagcagcctcagcagcctaggagattgtttgactctcctcaa
caacaacagggctcttcccaagagggccagcaaagttttaatccaatgcaacaagcgtat
cttcagtttgctttacaggcacagcaacaaaaggcacagcagcaagctagaatgggaatg
atgggttcatctaaggatcaagacgcacggatgggtatgttgaatatgcaaggcgcgatg
ccgatgcaggcatctaatcaggctcagggctcttcgtctaatccatctgctgaacagttt
gctcgcggtgaaaggcagatggaatcaggtcacgaaacaaaaccccatccccagcaagtt
gggactggacaactaatgcctggaaatattacaaggccaatgcaggcaccacagggtccg
cagggtgtcaataatatggggaccaaccaactcgcgttttcgcagcagtggcaggccatg
caggcatgggcgcgcgagcgtaatattgatctctcgcatcctgccaacgcaagccaaatg
tcgcacatactccagggaagaatggttgcccaacagaaagctaatgaaggcaatgtggct
tcacagtcaccatctattccagtgtctagccagccatcttcatcttcaggtgttccaggt
gagaactcgcctcgtcccaactctgctggtgatatctctgggcagtctggatcaggaaag
gccagacatgcaatacctaccagctcatttgcctcgacttccagtcccagaatgatgaac
cctgctgcgaatcccttctccgcccaagggagagataatccaccgtatcctcgacattta
gttcagcctacaaatgggatgccatcaggaaattccatgcagacgtctgcaaatgagacg
catgttttggatcacaatgcgtctacaaataaaggtttaggttctgctgaacatttgcag
atgcagcagcctaggcagatgaatgcacccagtccaaaagctgttatatctgacgctggt
ttactcaataaatcttcccttcaaagtggacaggggatcaaacaagaacaacagcgatca
ggatttaccaaacaacaactccatgttctcaaagcccagatactggcatttcgtcgtttg
aagaaaggagaaggttctttgcctcaggagctttttaaatctattgctccaccaccgctt
gaagtgcagacgccgttgcagatttttcctgtgagggtacatggtcaggataggtcttca
gacaaaactgtagaaaaccaagcaaggtcactggagtctggcaaagagtctcagactgct
gcttcttcaaatggacagatttttgctaaagaggaagataatgttggaggtacagaagta
cctttggcgacgggccacagccaattatttcaaaatctgggaaaagaagctgcttctact
gctgcggctacgaaagaggagcaacaagctgatgtattccctgttaagtcagatcaagga
gcagatgctagtactcaacagactcctagaagtgattctaatgctgataagggaaaagct
gttgcatctgatggaggccaatctaatgttccgccacaagcaaactctccccagcagcct
aaggatacagcccctgccaggaaatatcatggaccattgtttgattttccctttttcact
cgaaaacatgacacttatggatctgcaacagccaatgccaacaacaacctcacattagct
tatgatatcaaagacctggtctgtgaagaaggtgcagaattcttcaacaagaaaaggaca
gacagtttgaacaagataaatggtctcctagcaacaaacttggaaaggaaaaggattagg
cctgatcttgttttacggcttcagattgaagagaaaaagctcaggctatcggctcttcag
tctcgtgttagagatgaagtggatcgacagcagcaggatataatgtccatgcctgatagg
ccataccgtaaatttgtgaggttgtgcgaacgacaacgccttgaaatgaatagacaagta
ctggccaaccagaaagctgttagagagaagcagctgaaaaccatttttcagtggcgtaag
aaactccttgaggcacactggtctatacgtgatgcacgcactgctcgtaacaggggagtt
gccaaataccatgaaaagatgttgagagagttctcgaaaagaccagatgatggccggaac
aaaaggatggaggcattgaaaaataatgacgtagaaaggtacagggagatgttgctggaa
cagcaaacaaatatacccggtgatgctgctgaaagatataatgttctctcttcatttttg
acccaaacggaagattatctccataaacttggaggtaagattactgcgacaaagaatcaa
caggaagtggaggaagcagcgaatgctgcagcaattgcagcgagattgcagggcctttca
gaagaagaggtcagggcggcagctgcttgtgctcgggaagaagttctgatcagaaataga
tttgtggaaatgaatgcgccaaaagataattcatctgttaacaagtattatactctggct
catgctgtaaatgaagtcgttgtgagacaaccatcgatgctccaagctggaactttgcgt
gattaccagctggttggattgcaatggatgctctccttgtataataacaaattaaatggg
atcttggctgatgagatgggtcttggaaaaactgtgcaggtaatggcactgattgcttac
cttatggagttcaaggggaattatggaccacatctcatcatcgttcccaatgctgttctg
gtgaactggaagagtgaactccatacttggctgccatctgtttcatgcatatattatgtt
ggtacaaaggatcaacgttcaaaattgttctctcaggaggtttgcgccatgaagttcaat
gtcctcgttacgacttatgagttcattatgtatgatcgatcaaaactctcaaaagttgac
tggaaatatattgttattgatgaagcacaacggatgaaggacagagaatctgttttggcc
cgagatcttgatcggtatcgctgccagaggagattacttctcactgggacacctctacag
aacgatctgaaagagctttggtcactattgaatctcctccttcctgatgtctttgacaat
cgaaaagcatttcatgattggttcgctcaaccctttcaaagagaaggtccttcgcataat
atagaggatgactggctggagactgagaaaaaggtcatagtcattcacaggcttcatcaa
attttagagccgttcatgctcaggcgtcgtgttgaggatgtcgaaggttcacttcctcct
aaggtttccgtagttttaagatgtaggatgtcttctattcagagtgccgtttatgattgg
atcaaagctactggaactctaagagttgatccagacgatgaaaaacttaaggctcagaag
aatccaatctaccaagccaagatatataagactttaaataataggtgcatggagttgagg
aaaacatgcaatcatccgttgctcaattatccatatttcaatgatctttccaaggatttt
ctcgtaaggtcgtgtggaaaattgtggattctggatagaattcttataaagctgcagagg
acaggccatcgtgtattactcttcagtacaatgactaaactccttgatatcttggaagag
tatctgcaatggaggaggcttgtataccgaagaatagatgggactaccagtctagaagat
cgggaatcagctattgtggatttcaatgatccggatactgattgctttattttcctgctt
agtatacgtgcagctggaaggggtctcaaccttcagactgctgacacagttgtgatatat
gatccggatccaaaccccaagaatgaggaacaagcagttgccagagcccatcgtattggg
cagacgagggaagtaaaagtgatttatatggaggcagttgttgaaaaaatttccagccat
caaaaggaggacgagcttagaagtggtggatcaatggacctagaggatgacttggctgga
aaggaccgttatataggatctattgagggtctcataaggaacaatattcagcagtacaag
atcgacatggctgatgaagtcattaatgctgggcggtttgaccaaagaacgactcatgaa
gagcggcgaatgacattggagactttattgcatgatgacgagagatatcaagaaaccgtc
catgatgtaccttctctccatgaggtgaacaggatgattgccagaagcgaggaagaagtt
gagttattcgatcagatggatgaagaatttgactggaccgaagagatgacttgtcatgag
caggtgcctaagtggcttcgagctagtaccagagaggtgaatactactgttgctgatttg
tctaagaaaccgtcaaagaacatgttgtcaagcagtaatctaattgtgcaaactggcggg
cctggaggtgagagaaaaagagggcgtcccaagagcaaaaagattaactacaaggaaatt
gaagatgacattggattattttctgaggaaagctctgaggaagtgaacgttgattctggg
aacgaagaagagggagacattggacaatctgatgatgatgagctaactggtgctcttggt
gatcaacaaaccaacaatggcgaatctgatggagagaaccccgtcgctggttatgattat
cctccgcggtctggtagttataaaaaagtccctccacaggatgatgccggttcttcagaa
tcttcgccagaaagtcatagatcgaaagagatggcttctcctgtttcttcaaaaaaattt
ggctctttgtctgcattggacactaggccaggttctgtctcgaaaagactggtagatgac
ctagaagatggggaaataggagcctctggggattctcacatagatctccaacgatcctat
gaccgtgatgaagggggaggagaacaggttttgcaacctacaataaaacggaaacggagt
attcgtctaagaccccgtcaaacagcagaaggaacagacgttagtgatgtgcctgcagct
cagccattgcaagtcgatcgtagctatcgatcaaaattgaggacagttgctgactcgcat
ggttcaagacaagatcagagtgattcatcctcgagactcaggagtttacctgcaaagaag
gtagcgaatacttccaagctgcatgtatcatcaccaaagtctggtagattgaatgccaca
cagcttcccgtggaggacaacgatgaagctgctagagaaacatgggatggaactagtcct
attggctcgtcaaatgcaggtgcaagaatgtcccacaccatacagaaacggtgcaaaacc
gtcattagcaaactccaaagaagaatcgacaaggaaggtcagcagattgtgccaatgctg
acgaatttgtggaagagaattcagaatggttatgcagctggaggtgtgaataatcttttg
gagctacgagagatagatcagcgggtggaaaggctagagtacgtaggagttatggaactc
gcatctgacgtgcagtatatgctaaggggagcaatgcaattctatggattctcacacgag
gtgagatctgaagcaaggaaggttcacaacctcttcttcgatctactgaaaatgtctttt
ccagacacagacttccgggaagcaagaaacgctctttccttctctggcccaagcccaact
ttggtatctacatcgtcaccaagaggagcagttggtattagtcagggtaagaggccaaag
ccggtagatgaggaggaaccggaggagccaagctctcctcagagacgtcaacaacgcgag
aactcaaggatcagagtacagatacctcagaaagatccaaagcttggcgggacatcaagc
cacaccgatgagtctccaattctagctcatccaggggaactagtaatctgcaagaagaag
aggaaagacagagagaagtctgctccgagaacccgaaccgctggctccagcagcccggtt
tcgcctcaggctatgataggtcgtggtcttagaagtccagtgtctggttcagttacaagg
gaaacaaggctagctcaagctactcatccgaacaacagcggcgctgctggtgattcagtt
ggatgggctaatccggtgaagaggctacgaacagattctggtaaaagaaggccaagtcat
ttgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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