KEGG   Brassica rapa (field mustard): 103867525
Entry
103867525         CDS       T03449                                 
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
  KO
K18999  RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:brp01009]
    103867525
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brp03021]
    103867525
Enzymes [BR:brp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     103867525
Protein phosphatases and associated proteins [BR:brp01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   103867525
Transcription machinery [BR:brp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     103867525
SSDB
Motif
Pfam: NIF BRCT PTCB-BRCT
Other DBs
NCBI-GeneID: 103867525
NCBI-ProteinID: XP_009143847
UniProt: M4CMP9
Position
A05:6068039..6075263
AA seq 1199 aa
MGNDEDLIVLAAGVEDGEIAAASGNNPIEVRQSTVADGGDVDVGAVAGGGRGGGFDGNSR
VWTMRDLMTKYPEYRGYANSGLSNFAWAQAVQNKPLSEGLGKEYERRESGDKIVIEDSDD
EKEEGELEEGEIDLDSGSTRDDEMENESLVVLTSVADEVEDDRVRKERELESKVKMIRDV
LESTSLVQAQIAFEGVCSRLLGALESLRELVSDNDDFPKRDTLMQLSFASLQTINSVFTS
MNNMSKELNKDTMSRLVSLVNDHCSRFLSSNQRIEIESMNQNLRRSAIPLNVGASSEENV
NRMTQTSNGDLFPAKNLSTEGTRRGAFYARSRLPLLDLHKDHDADSLPSPTRETTPSLPV
NGRHMMVRPGFPFGKEGQTSEGAKVHHPYESEALKAVSNYQKKFGVNSLFKSDDLPSPTP
SGEPNEGNGGTGGEVSSSVVASTKPGTLMTYGQDVPLPSTFSSRSMPVANAVSSSTVPPH
PLSIYGMSAPTGATQTVVASDQTVKPSAKSRDPRLRLAKPDGAASVTISPRVVPSTELVN
QRKQKATSELFIDGPTWKRKKSDNDAQKAANIGGWLEDTESSGHPKLESKPRMIETGVTS
MKTSVMPTNAVSVTPKVTTATSTEALSSLFKDFAENSTMLNPTMIMNILKMGQRQTVPEK
APQKPVDPRRAAQLPGSSSVPPVVAPPVSIPASNALPANFPQPGAPKDESGSIRMKPRDP
RRILLGSTVQRTDSVAEKQSKLNDSSTLKGKTEVLETPSQLVPRQSISLNGTSNMRVSGE
PVRGKTPDFTKNLKNVADMSVLSQQVGNPLATTHAADLKTDKDQEESASVSAASVTAAAG
PTRSMNSWGDVEHLFEGYDDKQRVAIQKERTRRLEEQKKMFGSKKLSLVLDLDHTLLNSA
KFHEVETAHEAMLRKKEEQDRDKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLY
TMGNKLYATEMAKLLDPEGVLFNGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVI
IDDSVRVWPHNKMNLIVVERYTYFPCSRRQFGLLGPSLLEVDFDERPEEGTLASTLAVIE
RIHKNFFSHTSLDEADVRNILASEQRKILAGCRIVFSRIFPVGEANPQLHPLWQTAEQFG
AVCTTQADEHITHVVTNSLGTDKVNWALSRGKFVVHPGWVEASAFLYQRANESNFAIKP
NT seq 3600 nt   +upstreamnt  +downstreamnt
atggggaacgatgaggatttgattgtgttggcggcgggtgtggaggatggagagatcgct
gctgcgtcggggaacaatccgattgaagttaggcagagtacggtggctgatggcggagat
gtcgatgttggcgctgtggccggaggaggaagaggaggaggatttgacggcaattctagg
gtttggacaatgcgtgatttgatgacgaagtatcctgagtaccgcggatacgcgaactcg
ggtttgtcgaacttcgcttgggcgcaagctgtgcagaacaagccgctgagtgaaggtttg
gggaaggagtatgagaggagagagagtggtgataagattgtgattgaagacagtgatgat
gagaaggaggaaggagagttggaggaaggggagattgatttggactctggttcaacaaga
gatgatgagatggaaaatgagtctcttgttgtcttgacaagtgttgctgacgaagtggaa
gatgatagggttcggaaggagagagagttggagagtaaagtgaaaatgatccgtgatgtg
ttggagagtacgtccttggttcaagcgcagatagcatttgaaggagtgtgttccagactt
ttgggtgctttggagtctttgcgagagcttgtttctgacaatgatgattttccgaagagg
gatactttaatgcaattgtcatttgcttctcttcagaccatcaactctgtgtttacctcc
atgaacaatatgtccaaggagcttaataaggatactatgtcaagattggtatctctggta
aatgaccattgttccaggtttctctcatctaaccagagaattgagatagagtccatgaat
caaaatttaagacgttctgctattccacttaacgttggagccagcagtgaggagaatgtt
aaccgaatgactcagacaagtaatggtgatttgtttcctgcaaagaatctgtctacagaa
ggtacccgtagaggagccttctacgcaagaagcaggctgcctctgctagaccttcataag
gaccatgatgcagacagccttccatcgcccacaagggaaacaacaccaagtttacccgta
aatggtcgccatatgatggttagaccaggtttcccctttggtaaagagggccaaacgagt
gaaggtgccaaagtccatcatccatatgagagtgaggcccttaaagcagtttcgaattac
cagaaaaaatttggagttaattcattatttaaatcagatgaccttccaagcccaacaccg
tcaggagaacctaatgaaggcaatggaggcactggtggcgaagtttctagttctgttgtt
gccagtacaaagccgggtactctcatgacttatgggcaagacgttcctctcccctccact
tttagttctagaagcatgcctgttgcaaatgctgtatctagcagcactgttccaccacat
cctttgtccatttacggtatgtctgcaccaactggtgcaactcaaacagttgttgcatct
gatcagacagtgaaaccttctgcaaagagtcgagatccaagactacggcttgcaaaacct
gatggtgccgccagtgtaaccattagtcctagagtagtgccttctacagaattggtgaac
caaagaaagcaaaaagccaccagtgaactttttattgatgggcctacatggaaaagaaaa
aagagtgataatgatgcgcaaaaggctgctaatattggtggctggctagaggatacagaa
tcatcagggcacccaaaactggaatccaagcccaggatgattgagaccggagtaacatct
atgaaaacaagtgttatgccaacgaatgctgtctctgtgactccaaaagtaactacggca
acttcaactgaagcactgtcatctctttttaaggattttgcagaaaactctacaatgctt
aatcctacaatgattatgaatatccttaaaatgggacaaaggcaaacggtacctgagaaa
gctcctcagaagccagtggatccaagaagagcagcacaacttcctggatcttcttccgta
ccaccagtggtagctccaccagttagtatacctgcatcgaatgcgttacctgctaatttt
ccacagccaggagcgcctaaggatgaatctggaagcattcgcatgaaaccacgtgatcct
cgccgaatcctgcttggaagtactgttcaaagaacagactctgtggcagagaaacagtcc
aaactaaatgactcctccactctgaagggtaagacagaagtgttagaaacaccttcccag
ctcgttccacggcagagtattagcctgaatggtaccagcaacatgagagtttctggtgaa
cctgtcagaggaaagacacctgacttcaccaaaaatctgaaaaatgttgctgatatgtct
gtcttatcacaacaagttggcaatccattagcaactacacatgcagcagaccttaagaca
gacaaagatcaggaggagagtgcgtcagtttcagcagcatcagtaacggctgcagctggt
cccactcgttccatgaacagttggggagatgtggaacacctgtttgaaggatatgatgac
aagcagagagtagctatccaaaaagagagaactcgaaggttagaggaacagaagaaaatg
tttggatcaaaaaagctctctcttgtcttagatttagaccacacccttctcaactcagct
aagtttcatgaggttgaaaccgcccatgaggcgatgttgaggaagaaggaagaacaagat
cgtgacaaaccatatagacatctctttcgcttcccccacatgggaatgtggactaaactg
agaccagggatttggaattttttggagaaggctagcaagctgtacgagttacatctttac
actatgggcaacaaattgtacgctacagagatggccaaactgcttgatcctgaaggggtt
ctgtttaatgggcgagtcatatcgaaaggagatgatggagatcctcttgatggagatgaa
agagtacccaagagcaaagatttagaaggagttatgggcatggaatcgtctgttgtgatc
atagacgactctgtccgagtgtggcctcataacaaaatgaacttaatagttgttgaaaga
tatacttattttccttgcagtagacggcagtttgggcttcttggtccttctcttcttgag
gtagatttcgatgagcgacctgaggaaggcacattggcatctacattagcggttattgag
agaatacataaaaacttcttctctcacacttcactagacgaagcagatgtgaggaatatt
ttagcttccgagcaacggaagatcttggctggttgtcggattgtgtttagtcggatattt
ccagtgggtgaagccaacccgcagttgcatcccttgtggcagactgctgagcagtttggt
gctgtctgcacaacacaggctgatgaacatatcactcatgttgtcacaaactctctcgga
actgacaaggtgaattgggcattaagcaggggtaaatttgttgttcatcctggctgggtg
gaagcatcagcgtttctgtaccagagagcaaacgaaagcaattttgccatcaaaccttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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