KEGG   Brassica rapa (field mustard): 103869095
Entry
103869095         CDS       T03449                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103869095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103869095
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103869095
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     103869095
SSDB
Other DBs
NCBI-GeneID: 103869095
NCBI-ProteinID: XP_018514767
UniProt: A0A397ZAJ0
Position
A05:complement(18751373..18755291)
AA seq 785 aa
MERSDSRDLYNFVRSSSDSNSKLFDASQYEFFGQNLDEMSLGGIDDDDVVAPVLGHSATD
DDDEYHLFNKGGEGAGLGSLSDMDDLATTFAKLNRNVTGPKPLGVIGDRGSGSFSRESSS
ATDWTHDTELTNWLDEQDQEANRWSSQPQSSAHSQPLYRTSSYPQQPPPLQHYNSEPIIV
PESTFTSFPPPGSRSQQTSPGSLHRAPSLPTGSQMNFTAPSPLSNSRFHLSGPSHGPHYG
GNLARYASCGPTLGNVVQPHWATDPGLLHGDHSGLLHSLAQQQQLPPRNDLMSQHMMALQ
QRQSYAQLAALQSQLYRSYPSPSRKVSFGGGEVREQHKHKSSHRSRKNKGISQQASDAAS
QKSESGLQFRSKYMTSEEIESILKMQHSNSHSNDPYVNDYYHQARLAKKSSGSRAITHFY
PSQLKDHHHQPKSRNNSSEQHQQQVHVDALGKITLPYIRRPRALLEVDSSSPGLNDQKGS
GKHLEQEPLVAARVTIEDALGVLIDIVDIDRTLQSTRPQDGGAQVKRKRQILLEGLATAF
QLADPFSKTGQKSGLTAKDDVVFLRIATLPKGRKMLTKYIQLLVPGTEITRAVCMAIFRH
LRFLFGGLPSDTLAAETIANLAKTVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSSS
GDGASVVLISLLERAAEVVVVPRAVHGSSNDGLWRASFNEFFNLLTKYCRSKYETIRSQN
QGSAADVLELAIKREMPAELLRASLRHTNDDQRNYLLNFGRKPSAVSESASHARGGQINS
ESVMG
NT seq 2358 nt   +upstreamnt  +downstreamnt
atggagagatccgattccagggacctgtacaactttgttcgctcttcctcagattcaaat
agtaagctctttgatgcatctcagtatgagttttttgggcaaaatcttgacgaaatgtca
ttgggaggtattgacgatgacgatgtggtcgctcctgttcttggacattctgctactgat
gatgatgatgagtatcacttgtttaataaaggaggagagggtgcaggtttagggtcatta
tctgacatggatgatcttgccacgacttttgcaaagctaaatagaaatgtcacgggaccc
aaaccccttggagttattggtgacagaggatctggttccttttcaagagagagttcttct
gccaccgattggactcacgatacagagctcacaaactggttggacgagcaagatcaagag
gctaacagatggtcctcgcagccacagtcatctgctcattcacaacctttatacaggaca
tcctcttaccctcagcagccaccaccgttgcaacactacaatagtgaaccgatcattgta
ccagaatcaactttcacctcctttcccccgccaggcagcagatctcagcagacttcacct
ggaagcctccaccgcgctccttctcttcccaccggttctcagatgaatttcaccgcacct
tccccgctgtcaaactctagatttcatctttcaggaccctcacacgggcctcactatggt
ggtaatttggctagatatgcctcctgtggtcctacccttggtaacgttgtgcaacctcat
tgggccactgatcctggtcttctccacggagatcattctggcttattacatagtctggcg
caacaacaacaattgcctcctcgaaatgatcttatgtcgcaacatatgatggctctccag
cagaggcaatcgtatgctcagcttgcagcgctacagtctcagctgtacaggtcttatcca
tcaccatcacgtaaagtctcttttgggggtggtgaagttagggaacaacacaagcataag
tcttctcataggagtcgaaagaacaaaggcatatctcaacaggcatcagacgcagctagt
cagaaaagcgagagtggattgcagtttagatcaaagtacatgacttcagaggaaatagag
agtatactcaagatgcagcactctaattcacacagcaacgatccttatgtcaatgattat
taccaccaagctcgccttgccaagaagtcttctggatctagagcaatcactcacttctac
ccttctcagttgaaagaccaccaccaccaacctaagtcccgtaataatagttctgaacag
catcaacaacaagttcatgtagatgctcttgggaagatcacgcttccttacattcgcagg
ccacgtgcgttgcttgaggttgactcttcttctcctggtcttaatgatcaaaagggctca
gggaaacatttggagcaggaaccacttgtggcagctagggttacaattgaagatgctctt
ggagttcttatcgacatagttgacattgacaggactctccaatccacaaggccacaggac
ggaggtgctcaggttaagcgaaaacgccagatcctcctagaaggattagcgacagctttt
cagcttgctgatcccttcagcaaaaccgggcagaagtcagggctgactgctaaggatgat
gttgtctttctacgtatagcaactcttccaaagggtcgaaaaatgcttacaaagtacata
cagcttctagttccaggcactgagattactcgagctgtctgtatggctatattccgccac
ttgaggtttctcttcggcggcttgccttcggatactctggcagcagagacgattgctaat
cttgccaagacagtcacggtctgtgttcaagcaatggacctccgagcgctgagtgcttgc
cttgcagctgtggtttgttcttcggagcagccacctctgcgtcctattggaagctcttca
ggggatggtgcttcagttgtgttgatatctcttctcgagagagctgctgaagtagtggtg
gttcctcgagccgtccatgggagctctaatgatggactatggagagcctcgtttaatgag
ttcttcaaccttcttacgaaatactgcaggagcaagtatgagacgatccgtagccagaac
caagggagtgcagcggatgttttggagctggcgataaagagagaaatgcccgctgagctt
ttacgtgcgagcctccgtcataccaatgacgaccagaggaactatttgttaaactttggt
cgtaaaccgtcggccgttagtgagtctgcgtcgcatgcaaggggtggtcagatcaactct
gaatctgtgatgggttga

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