KEGG   Brassica rapa (field mustard): 103870478
Entry
103870478         CDS       T03449                                 
Name
(RefSeq) DNA gyrase subunit B, chloroplastic
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brp03032]
    103870478
   03400 DNA repair and recombination proteins [BR:brp03400]
    103870478
Enzymes [BR:brp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     103870478
DNA replication proteins [BR:brp03032]
 Prokaryotic type
  DNA Topoisomerases
   103870478
DNA repair and recombination proteins [BR:brp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      103870478
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 HATPase_c_2
Other DBs
NCBI-GeneID: 103870478
NCBI-ProteinID: XP_009146852
Position
A05:25406893..25413509
AA seq 731 aa
MALLQRPPSYLHLYFRLMASSRPRLFSHSICPSLHRHSSSLSSSTPRIKFQLAKVLSQRL
VIRNAVSPRSFMSSTMDTDSLHESSTSKDYSSEHIQVLEGLDPVRKRPGMYIGSTGSRGL
HHLVYEILDNAIDEAQAGFASKIDVVLHADGSVSIADDGRGIPTDLHPATRKSSLETVLT
VLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQHKYSRGKPITTL
TCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKVTISLKKEDE
DPERDLYSEYFYAGGLIEYVSWLNTDKKPLHDVLGFRKEINGTTVDVALQWCSDAYSDTM
LGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDINLSGEHVREGLTCIVSVK
VPDPEFEGQTKTRLGNPEVRKIVDQSLQEYLTEYLELHPDVLESIISKSLNAYKAALAAK
RARELVRSKSILKSSSLPGKLADCSSTDPAVSEIFIVEGDSAGGSAKQGRDRRFQAILPL
RGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNMDNLRYHKIIILTDADVDGAHI
RTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDEAALKQVIASFPGNASYN
IQRFKGLGEMMPEQLWETTMNPDTRILKQLVVDDAAETNVVFSSLMGARVDVRKELIKSA
ATRINVEHLDI
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggctcttcttcagaggccaccctcttatcttcacctctattttcgcctcatggcttct
tctcgtccccgtctcttctcccactctatatgcccctcactccaccgtcactcctcctcg
ctctcctcttcaacaccgaggataaagttccagttagctaaggttttgagtcagagactt
gtaattagaaatgcggtctcaccaaggtcctttatgtcatccaccatggacactgattct
ctccatgagagctccacctctaaggattacagttccgagcacattcaagtgttggaaggc
ttagaccctgtcaggaaaagacctggaatgtatattggtagcactggatctcgtggtttg
catcatctggtttatgagatacttgacaacgcaattgacgaggcacaagctggttttgct
tcaaagattgacgttgttttacatgcagatggttcagtcagcattgcagatgacggacgt
gggatacctacggacttgcatcccgcaacgagaaaatcttctttggagactgtcctcacg
gtcttacacgcagggggtaagtttggtggcaagagtagtgggtacagcgtgtctggtgga
ttgcatggtgtaggtttatcggttgtgaatgctttatcagaggcattggaggttattgtt
cgcagagatgggatggagttccagcataagtactctcgtggaaagcccataacaacactt
acttgtcatgtcctcccaccagagtcaaggggtactcaagggacatgcatcaggttttgg
cctgacaaagaagtattcacaactgcaattcagtttgaccataacactattgctggaaga
attagggagcttgcttttctaaatccaaaggttacaatctctctgaaaaaggaggatgaa
gatccagaaagggacctgtatagtgaatatttttatgctggaggtttaattgaatatgtt
agctggctaaataccgataagaaaccgctccatgatgtgctgggtttccggaaagagata
aatggcaccaccgttgacgttgcacttcagtggtgctcagatgcttattcagacacgatg
ctgggatacgcgaatagcattcgcaccattgatggtgggacacatattgaaggtgtgaag
gcttcgttaacaagaactctaaatagcctcgcaaaaaagttaaaggttatcaaggagaag
gatattaacttaagtggggaacatgttagagagggattgacctgcattgtctcagtcaag
gttcctgatcctgagtttgaaggtcaaacaaagacgagactaggaaatccagaggtgaga
aaaattgttgaccaatcactccaagagtacctcacggagtacttggaattgcatccggat
gtacttgaaagcatcatttccaaatccttgaatgcatacaaggctgctctggctgccaag
agagctagggagttggtcagatcaaaaagcattttgaagtcatcctcacttcctgggaaa
ctggcagattgctcatctacagatcctgcagtatctgagatttttatagtcgaaggagat
tcagctggtggcagcgcaaaacagggtcgtgacaggcgtttccaagcgattcttccttta
agaggtaaaatattgaatattgagagaaaggatgaagcagccatgtacaagaacgaagaa
attcaaaatctaattcttggtcttggccttggagtgaagggagaagattttaacatggat
aatttgcgttaccataagattatcatattaacagatgcagatgttgatggtgcacatatc
cggacacttctgctgacctttttcttcagataccagagagccttgtttgacgcgggttgc
atatacgttggtgttccacctcttttcaaggttgagagggggaaacaggcgcattactgc
tatgacgaggcagctcttaaacaagttatcgcttcgttccctggaaatgcatcctacaac
attcagaggtttaaaggtttgggtgagatgatgcctgagcagctatgggaaacaacaatg
aatccagatacaaggatactgaagcaactagttgttgatgacgcagcagaaacaaatgtg
gtcttttcatctctcatgggtgctagggtcgatgtccggaaggaactcatcaaaagcgct
gcgactagaatcaatgtagagcatcttgacatatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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