KEGG   Brassica rapa (field mustard): 103871842
Entry
103871842         CDS       T03449                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103871842
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:brp01002]
    103871842
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103871842
   04121 Ubiquitin system [BR:brp04121]
    103871842
Enzymes [BR:brp01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103871842
Peptidases and inhibitors [BR:brp01002]
 Metallo peptidases
  Family M67
   103871842
Membrane trafficking [BR:brp04131]
 Endosome - Lysosome transport
  Others
   Others
    103871842
Ubiquitin system [BR:brp04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    103871842
SSDB
Motif
Pfam: JAB Prok-JAB
Other DBs
NCBI-GeneID: 103871842
NCBI-ProteinID: XP_009148402
UniProt: M4DTS2
Position
A06:4147189..4148653
AA seq 224 aa
MVTLSFPSPSLSFVESGTCSKSTHVSRVLFSGPDEVHGESSEPSKILRDVHISERLMEDF
TELARENTEKDLETCGTLAAFLERGVFYVTTLIIPKQESTANSCQAMNEVDVFSIQNERE
LYPVGWIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSRSYGIFKLTDPGGM
EILRGCSETGFHPHKEPEDGNPVYEQCSNVYKNSNLRFEIFDLR
NT seq 675 nt   +upstreamnt  +downstreamnt
atggtaacgctgtcgtttccatctccctcgctctctttcgtagagagcgggacatgtagt
aaatcaactcacgtttctcgggttctgttctctggtccggatgaggttcacggagaatcg
tctgaaccatccaagatactaagagatgttcatatatcagagaggttgatggaggatttc
actgagctagcgagagagaacactgagaaggacctcgagacttgtggaactctcgctgcc
ttcctcgaaagaggagttttttatgtgaccactctgataatacctaagcaagaatcaact
gcgaactcttgtcaagccatgaatgaagtggatgtgttttctatacaaaacgaaagagag
ctttatcctgttgggtggattcatactcatccttctcagggctgtttcatgtcatcagtc
gatctgcatacccattactcgtatcaggtaatggtgccagaggcttttgcaattgtcgtg
gctccaacagatagctctaggagttatgggatatttaagctaacggaccctggaggaatg
gagatactgagaggctgctcggagacaggattccacccacacaaagaaccggaagatgga
aacccggtttatgagcaatgctcaaacgtctacaagaactccaaccttaggttcgagatt
ttcgatctgcgctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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