KEGG   Brassica rapa (field mustard): 103873014
Entry
103873014         CDS       T03449                                 
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
  KO
K03660  N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103873014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brp03400]
    103873014
Enzymes [BR:brp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     103873014
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     103873014
SSDB
Motif
Pfam: OGG_N HhH-GPD RecR_HhH HHH
Other DBs
NCBI-GeneID: 103873014
NCBI-ProteinID: XP_009149691
UniProt: M4DN57
Position
A06:9497486..9499411
AA seq 357 aa
MKRPRPPSPPSISAAAKPPLSPPPTPILKQKLQRTGAPKWLPLKLTQTELTLPLTFPTGQ
TFRWKQTGPVQYSGSIGPHLVSLRQRPGDETVSYCLHRSATSPNAAELALLDFLNAEISL
AELWSDFEMKDPRFGEVARHLRGARVLRQDPLECLIQFLCSSNNNIARITKMVDFVSSLG
LYLGEVEGFEFHQFPSLERLSRVSEDELRKAGFGYRAKYITGTVSALQSKPGGGDEWLLS
LRKLDLQDAIAALCTLPGVGPKVAACIALFSLDQHSAIPVDTHVWQIATRYLVPDLAGAK
LTNKLCSRVAEAFVSKYGEYAGWAQTLLFIAELPAQKALLQSFSQPIQLVKSAEKKK
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgaagagacctcgacccccatctccaccgtcgatctccgccgccgcaaaaccaccactt
tctcctccccctactccgattctcaaacagaagctacaaagaacaggagcaccaaagtgg
ctcccactaaaacttacccaaacggagctcacactaccgttaacattcccgacgggtcaa
acattccggtggaaacaaaccggaccggttcagtacagcggatcgatcggtcctcacctc
gtctctctccgccagcgtccaggagacgagacggtttcctactgcctccaccgcagcgct
acaagccctaacgccgcagagctcgcgcttctcgatttcctcaacgcggagatctcgcta
gccgagctgtggtccgatttcgagatgaaggatcctcgtttcggagaggtggcgaggcat
ctccgcggggcgcgtgtgctgaggcaggatccgttggagtgtttgattcagtttttgtgc
tcgtcgaacaacaacatcgcgaggattacgaagatggtggacttcgtgtcgtctttgggg
ttgtatctgggtgaggttgaggggtttgagtttcatcagttcccttcgttggaaaggttg
tctagggtttctgaggatgagcttagaaaggctggttttggatacagagcgaagtacata
acaggtactgtaagtgcgttgcagtcgaagccaggtggtggagatgaatggcttctgtct
ctacgcaaactggatctccaagatgcgattgctgctctgtgtacgttgcctggtgttggt
ccgaaggtagcagcttgcatagctctgttttcacttgatcagcatagtgccattcccgtt
gacacgcatgtctggcagatagccacaaggtaccttgtgccagaccttgccggtgccaaa
ctgacaaataaactctgcagcagagtggcagaagcatttgtgagtaaatatggggaatat
gctggttgggctcagacattgctcttcattgctgagttacccgcacagaaagctctcttg
cagtccttttcacagcccatccaactggttaaatctgcggaaaagaaaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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