KEGG   Brassica rapa (field mustard): 103873478
Entry
103873478         CDS       T03449                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 26 isoform X1
  KO
K11858  ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:brp01002]
    103873478
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103873478
Enzymes [BR:brp01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103873478
Peptidases and inhibitors [BR:brp01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103873478
Ubiquitin system [BR:brp04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103873478
SSDB
Motif
Pfam: UCH DUSP UCH_1 ubiquitin
Other DBs
NCBI-GeneID: 103873478
NCBI-ProteinID: XP_009150133
Position
A06:complement(17534475..17543991)
AA seq 1054 aa
MRPNTRNKNKRQRPSETVDSSSQILRKMYEANDVTEEEVNHLFMIHKKPLCQGCRVNTRD
NPNCFCALVPPPNGTRKSGLWQKTSELIQALGPDLSSHRRASLSSPSGLTNLGATCYANS
ILQCLYMNSAFRDGVFSLEAEVLQQHPVLDQIARLFAQLRASNRSFVDSDAFVKTLELDN
EIQQDTHEFLTLLLSLLERCLSHSAVSKAQTIVQHLFRGRVSHVTSCSKCGRDSEASSKV
EDFYALELNVKGLKSLDDSLSDYLSLEHLNGDNQYFCASCDARVDATRCIKLRTLPPVIT
FQLKRCVFLPKTTAKKKITSSFSFPQVLDMRSRLAESSESELTYELSAVLIHKGSAVNSG
HYVAHIKDEKTGLWWKFDDEQVSELGTHPFNESSSSTPKSETNVASNSGKNTTESEVFSS
SDAYMLIYSLRSSKLESWEGQREDPIDITKGDVDGVQQPEGGYLPPHLDEWISDLNATFL
EGCKQFDLRKERELNTLTERRQEVRTILSEAAVQSLEDQYFWISTDWLRLWADTISPPAL
DNTPLLCSHGKVLASKITCMKRISELAWTKLESKFNGGPKLGKGDYCRECLMDSARMVVS
SDSYRDRRTFMKSIATDVLSGKFEDGEYYVSKAWLQQWVKRKNLDAPSEADAGPTNAITC
SHGGLMPEQAPGAKRILVPENFWSFLVEDALKVTPEDTSDCPCFPLDSSQCSHCTSELSE
VADVEDALRTIKAKQRQNHEKLATGKSIALTPQSRYFLLPSPWLVQWRSYISMTGKNSSS
VPDPELLSGVIDTLKCEKHKRLLERLPELVCKRGSFFQKNPSTDKLTIIPEDDWKCFCEE
WGGIMENGVSAFTETGNNRHGSASQDVIDLEKDMDIDSQQLILRTSPEVCEECIGDRESY
ELMQKLSYSEGEVSVSLVRGKEAPKSMLEASDSGLEVDRRTSKRSRRTNYGKQTSLKVSA
TTTVYNLKMMIWQLLGVMKENQELHKGTQVIDQESATLADMNIFPGDKLWVRDTEIHEHR
DIADEICDKKMGHQDIEAGFRGTLLTGDITSEAR
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgagacctaacactcgaaacaagaacaaaaggcaaagaccttccgaaactgttgattcc
tcttctcaaattctcagaaaaatgtacgaagctaatgatgtaacagaggaagaagtaaac
catctcttcatgatacacaagaagccactctgtcaaggctgccgcgtcaacacccgcgac
aaccccaactgcttctgcgccctcgttccacctcctaacggaacccgcaagtctggtctc
tggcagaagacttccgagctcatccaagctcttggtcctgatctctcctcccaccgtcgt
gcctctctctcttccccctctggtttgaccaacttgggagctacttgctatgctaacagc
atcctccagtgcctctacatgaactctgcttttcgggatggtgttttctctcttgaagct
gaggtcttgcagcagcatcctgtcttggatcagattgcgaggctctttgcgcagctgcgt
gctagcaacaggtcttttgttgactctgatgcttttgtgaagacgctcgagttggataat
gagattcagcaggatacgcatgagttcttgactttgcttttgtccttgcttgagcgttgc
ttaagccattctgctgtttccaaggcccaaaccattgtgcaacatctcttccgcggtcgt
gtctctcatgtcacctcgtgctcaaagtgtgggagggattcagaagcttcctcaaaggtg
gaggatttctatgcccttgagctgaatgtcaagggtcttaaaagtttggatgatagtttg
agtgattacctcagcttggagcatctcaatggggacaatcagtatttttgtgcgagctgc
gatgctagagttgacgccacacgctgcattaagctgcgcacactacctcctgttatcact
tttcagctcaagcgatgtgttttcctcccaaagactactgctaagaagaaaattacatcc
tcgttttcctttcctcaagtgctggatatgagatcgagattggcagagtcttctgagagt
gagttgacatacgaactctctgctgtcttaatccacaaaggaagcgctgtgaacagtgga
cattacgttgctcacatcaaagatgaaaagactggcttgtggtggaaatttgacgatgag
caagtgtcagaactgggtacacatccattcaatgaatcctcttcttcaactccaaagtcc
gagactaatgttgcctctaatagtgggaaaaacaccacagagtcagaggttttctcatcc
agtgatgcttatatgctgatttatagtcttcggtccagtaaactagaaagttgggaagga
caaagagaggatcctattgacataactaaaggagatgttgatggtgttcaacagcctgaa
ggtggttatcttccgccacatctcgatgaatggatcagtgacctgaacgcaacattcctt
gagggttgcaagcaatttgatttaagaaaggaaagagaattgaatactttgactgaaagg
aggcaagaagtaagaacaatactttcagaagctgctgttcagtcacttgaagatcaatat
ttttggatctccacagattggcttcgtctatgggctgataccatctcaccaccagctttg
gacaacacccctttactgtgttcccacgggaaagttcttgcctcaaaaattacttgcatg
aagcgtatatctgaacttgcatggaccaagttagaatcaaagttcaatggtggaccaaag
ttagggaaaggggactactgcagggaatgccttatggatagtgctcgcatggttgtctct
tctgacagctatagggatcgaagaacattcatgaaaagcatagcaaccgatgttctttcg
ggaaagtttgaggacggagagtattacgtctctaaagcatggttgcagcaatgggtaaaa
aggaaaaaccttgatgctcccagtgaagcagatgcaggcccaacaaatgcaatcacgtgc
agtcatggggggctgatgcctgagcaagcgccaggggccaaaaggattctagttccagag
aacttctggtcattccttgttgaagatgctttaaaagtgacgccagaagatacttcggac
tgtccttgtttccctctggactccagccaatgttctcactgcacatcggaactctctgag
gttgctgacgtcgaggatgcactaagaacaataaaggccaagcagcgccaaaaccacgag
aagttagccacgggaaagagcatagcattaacgccacaaagccgatatttcttgttacct
tctccgtggctagtgcagtggagaagctatattagcatgactggaaaaaacagttcctca
gtaccagaccctgaacttcttagtggagtcattgatactctcaagtgcgagaagcacaaa
cgactcctagaaaggctccctgaacttgtctgcaaacgtggctcattttttcagaaaaat
ccatctacggacaagctgacaatcatccctgaggatgattggaaatgtttctgtgaggag
tggggaggtatcatggagaatggagtctctgcttttactgagactggtaataacaggcac
ggaagtgcatctcaggacgttattgaccttgagaaggatatggacattgatagtcagcag
cttattcttaggacatccccggaggtttgtgaggaatgcataggagacagagagagctat
gagttgatgcagaagctcagttactctgaaggagaagtatctgtcagcttggtgcgcgga
aaggaagctccaaagtcaatgttagaggcatctgactccggcttggaggtggaccggcgt
acctcaaagcggtcacggagaacaaactatgggaagcagaccagcttaaaagtttctgca
acaacgactgtgtacaacttaaagatgatgatatggcaattacttggggtgatgaaagag
aaccaagaacttcacaaaggcacacaagtgattgatcaggaatctgcaactcttgcagac
atgaatatattccctggcgacaagctttgggtgagagataccgagattcacgaacaccgc
gacattgctgatgagatatgcgataagaagatggggcatcaagatatcgaagcagggttt
cgcgggacgcttttgacgggagatatcacttctgaagcccgttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system