KEGG   Brassica rapa (field mustard): 103874373
Entry
103874373         CDS       T03449                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein RRC1
  KO
K12842  U2-associated protein SR140
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103874373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:brp03041]
    103874373
Spliceosome [BR:brp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103874373
 Complex B
    103874373
SSDB
Motif
Pfam: CID CTK3
Other DBs
NCBI-GeneID: 103874373
NCBI-ProteinID: XP_009151030
Position
A06:complement(22239683..22244721)
AA seq 486 aa
MSSFSITRKKTPFQKHREEEEARKKKKEEYETARPYQNSWSPFKATMRLSLLIEVAPLTP
ATSTRLIPKGDTLQRWRTEPYIMITGSGRWIPPPRPVTKSLEHDKESTDTYAAGRSRREE
VERTLTDPQRDEFEDMLRALTLERSQIKEAIGFALDNADAAEEVVEVLTESLTLNETSIP
TKVARLLLVSDILHNSSVPVKNASAYRTKFEAALPDIMESFNDLYRSITGRITAEALKER
VLKVLQVWADWFLFLDAYIYGLRATFLRSGTSGVTSFHSLCGDEPEIEKKGSIDNLSDII
NPDTALAVGKGAARQELMDLPISEIXRRCRQNGLSLVGGRVVMVARLLSLEDTEKQRGYE
AVDEIPKYPQDHSSWGEVKNECEVIRNSYAEVQMKEPMTISISQPELKAFVEKEKNDLIL
TASKWAREDDETDDVQKKSYSPGSDNTGGVTFKVQIKRKKLIRIQRGQQKPAFNCREINC
RAQGKA
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgagttctttctccatcacccgtaagaaaactccattccagaaacacagagaagaagaa
gaagccaggaagaagaagaaagaggagtatgagacggctcgtccgtatcagaattcgtgg
agtcctttcaaggcgacaatgcgactaagtcttttgatcgaggtggcaccattaacccca
gcgacaagcacaaggttgattccgaagggtgacacacttcaaaggtggagaacggagccg
tatatcatgataactggtagtggaagatggataccgccaccgcggcctgtaactaagagc
ctggagcatgacaaagagtcaacagacacatatgcagcgggaagaagcaggcgagaggaa
gttgagaggactctgaccgatcctcaaagggatgagttcgaggacatgttgcgtgctcta
actttagaaaggagtcaaataaaagaagctataggatttgctttagataatgcagatgca
gcggaagaggttgttgaagttttgacggagtccctgaccctgaatgagacatcaattccg
actaaagttgctagactcctgcttgtgtctgatattcttcataatagcagcgtacctgtt
aaaaatgcatctgcataccgaactaagttcgaggcagcactgcccgatataatggaaagc
ttcaatgatctgtaccggagcataaccggaagaattactgctgaggctctaaaagaacgg
gttctcaaagtactgcaggtatgggcagattggtttctgtttttagacgcatacatatat
ggactacgtgccacatttcttcgatcagggacctctggtgttacttcatttcattctctg
tgcggtgatgaacctgaaatagagaagaaaggttccattgataatttgagcgatattatc
aatccagatactgcactggcagtaggcaaaggcgctgcaaggcaagagctgatggattta
ccaatttctgagatttagagacgctgccggcagaatggactgtctcttgtagggggcaga
gtagtgatggtcgctcggctgctaagccttgaagatacagagaaacaacgcggctatgaa
gcagtggatgaaattccaaagtatccgcaagaccattcaagctggggagaagttaagaat
gagtgcgaggttatcagaaacagctatgcagaggttcaaatgaaagagcctatgacaata
tcaatctcacagcctgagctgaaagcctttgtagaaaaagagaagaatgaccttatattg
acagcttcaaaatgggctagagaggatgacgaaactgacgatgtacaaaagaagagctac
tctccaggaagcgacaatactggtggggtaacttttaaagtacaaatcaaacgaaagaag
cttatcaggatccaacgagggcaacagaaacctgcttttaactgcagagaaatcaattgt
agagcgcaaggaaaagcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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