KEGG   Brassica rapa (field mustard): 108871174
Entry
108871174         CDS       T03449                                 
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 5
  KO
K18999  RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:brp01009]
    108871174
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brp03021]
    108871174
Enzymes [BR:brp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     108871174
Protein phosphatases and associated proteins [BR:brp01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   108871174
Transcription machinery [BR:brp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     108871174
SSDB
Motif
Pfam: NIF DUF3678 DUF5715
Other DBs
NCBI-GeneID: 108871174
NCBI-ProteinID: XP_018512863
UniProt: M4CC24
Position
A03:complement(19266308..19272955)
AA seq 586 aa
MSVLEAVINTSFSPSSNTCLHSVSLHGICIACNSIVDELDLYRRPFEYLSPGLQLTQDAV
ALTKRLETLSSSLGKQKLHLVLDLDHTLLQAEKVYRLAEAERYLIGEAGSRDDLWKLKSS
DFLVKLRPLLRDFLREANKMFTMHVYTMGTRSYAEAILELIDPDRFYFGKRVITRDESPC
TKTLDLVLADERGVMIVDDTRDVWPDHKSNLIVISRYKYFRMKRSQHYSEEKTDESESKS
GLVDVFRILKEVHRRFFKVREELASKDVRLLNNETMSLVEKISLEQRAKRQRIEPVINTS
SYLPSSRRCRHWFVRYGICTTCKSTVDESQGRAFDYLSHGLQLSHEAVAVTKHLTTLVSC
SNEKKLHLVLDLDHTLLHTTRIPRLTQAEKYLIEEADSNTRDDLYKWKAPGDPLVFLTKL
RPYVREFLKEANEMFTMYAYTMGNRDYSKFILDVIDPKQIYFGERVITRDESPYMKTLDL
VLAHERGVVIVDDTRDVWPDHKRNLIEISRYKYFRMNNSRHSKPYSEEKIDESEGNGGLA
NVLKLLKEVHCEFFRVADEKELESKDVRLLLQEIEFNRINKEYFIR
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgtctgtactcgaagcggtgatcaacacctccttctcaccgtcttccaacacatgtctt
cactcggtctctctccacggaatctgcatcgcttgcaactcgatcgtcgacgaacttgac
ctctaccgcagaccgttcgaatatctttcccccggtttacagctaacccaggacgccgta
gcgttaaccaaacgcctcgaaactttatcatcttccctcggcaagcagaaactccacttg
gtcctcgacttggaccacacgctcctccaagccgaaaaagtttaccgtctcgccgaagca
gagaggtatctaatcggcgaagcgggttctagggacgatctgtggaagttgaaatcaagt
gacttcttggtaaagctaaggcctctccttagagatttcttgagagaagccaacaagatg
ttcaccatgcacgtttacacgatgggtactcgctcctacgccgaagccatcttggagctg
atcgatccggatcgattctatttcggtaaaagagtgataacgagagacgagagtccttgt
acgaagacgcttgatttggttttggcggatgagcgtggagtgatgattgtggatgataca
cgtgatgtatggcctgatcacaagagtaatttgattgtaattagcagatacaagtacttc
agaatgaagagaagccaacactactctgaggagaagactgacgaaagtgaaagcaagagt
ggattggttgatgtttttagaatactaaaggaagttcaccgtagattctttaaggttaga
gaagagttggcctcaaaggacgtgaggctgctaaataacgaaaccatgtcccttgttgag
aaaatttctcttgaacagagagccaaaagacaaagaatcgaacccgtgatcaacacgtct
tcttacttgccgtcttctcgtagatgtcgtcactggtttgtccgttacggaatctgcacc
acatgcaaatcaacagttgatgaatctcaaggtagagcattcgattatctttcccatggt
ttacagctaagccatgaggctgtagcggtgacaaaacaccttaccacactagtctcttgt
tccaacgagaagaaacttcatctagttcttgacttggaccacacgcttctccacaccact
cgtattccacgtctcacccaagcagagaagtatctaatcgaagaagcggattcgaataca
agggatgatctgtacaagtggaaagccccaggtgatcccttggtgttcttgacaaagcta
aggccttatgttcgcgagttcttgaaagaagctaatgagatgttcacaatgtatgcttac
acaatgggtaaccgcgactactctaaattcatcttggacgtgattgatccgaagcaaatc
tatttcggggaaagagtgataacaagagatgagagtccttacatgaagacgcttgattta
gttttggctcatgagcgtggagtggtgatcgtggatgatacacgtgatgtatggcctgat
cacaagcgtaacttgattgaaattagcagatacaagtatttcaggatgaacaacagccga
cactcaaagccatactctgaggagaagatagacgaaagtgaaggcaacggtggattggct
aatgttttgaagttacttaaagaagttcactgtgagttcttcagagtcgccgatgaaaaa
gagttggagtcaaaagacgtgaggctgctgctacaagagatagaattcaatcgtattaac
aaagaatattttattaggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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