KEGG   Bipolaris sorokiniana: COCSADRAFT_151357
Entry
COCSADRAFT_151357 CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K14300  nuclear pore complex protein Nup133
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCSADRAFT_151357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsc03019]
    COCSADRAFT_151357
   03036 Chromosome and associated proteins [BR:bsc03036]
    COCSADRAFT_151357
Messenger RNA biogenesis [BR:bsc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     COCSADRAFT_151357
Chromosome and associated proteins [BR:bsc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    COCSADRAFT_151357
SSDB
Motif
Pfam: Nucleoporin_C Nucleoporin_N
Other DBs
NCBI-GeneID: 19131555
NCBI-ProteinID: XP_007704308
JGI: Cocsa1_151357
UniProt: M2SC70
Position
Unknown
AA seq 1366 aa
MFSPEASIQSARSSLRNPRRRQRKDSDGPQQQRSRKRSKLNDEAFKDPAGAHMNGNGSVQ
INGHAVQSVENSVVLVDMPVREKKTAPKQRAPKEETGSYLTKNANYSVKKLPGFPSALLR
PSTPIYATALPSAGLALALTSDRALIWDYSAPNGPTKVVSLNLGFGLRPSEPLPLGAIVR
NGPTNDFGVVALAPSTGKISFWESIDSADTRSLYPQRQQGVEGFVKLYSGETITDLVDVE
HAGYVLVFSSGRLAQLTLRDSQGRPNVVTTVLSAPNSSGGSFFSLKGLLGGSIRKTIASV
KARTSQSKGHMDVISATKNGLFQLWDLSWSGQHSHHRDVDVHDTILSVLQVNTVPEIRNQ
QDVHVLDFAIVEQQQRHDVVELLVLVALSGRDSMDYSLLELVLSGAGGTVNRVIPLRNFH
QPQLPKEPTGTLLVPQPGHTAYVQFPGAMCVTALTRPEESPEAQLLADAGRPSLPFQDTI
YFRPDVTISGNALEIALRKDRRATALIFVQQFGLLQISALSPTTDEQDNERAKVTALSKL
EQATFFSTIPGNIIDFSVKSRFSFPEEETAEAARAISAGILSSSYDYLEKSTSNMDEQFQ
QRTSALQTLISQLQSNYPPLSFDTKWRLLWHAEKLTAAHKLWNWYQDKLQDQQAHPDAYP
EKILMSDIIRALNERYKTPIDPELGETDTIRQFFLKDVDSLGVLIPWGWFYLRTFYMKEG
AKEQGSIMQRLSEGTDVMLVALEAAFKFRQANVELYGLDGDCLDDGILRPEEGYDLLPQF
WTSSHNIVSSIRSLIDVGRNLAVENYEEGYQEILAQKIGKDNPRLVKLGCQTHIERFQWA
LAQSDEKTRAMGRSLKDEWNNNVRPSHIMGLMEIGLATEGMKLAEQYRDMPTLVSLIWEE
TNWLESEKASTRSKMEQAESTVKLNRIKERIARYFAIYGDEWAGAFYNKYITENQAGQLF
MKDYLNQPALTKFLRSEPSRVRLAWINDVCGEKDYEAAAEALYEAGSKQETNSWCQRVEL
SMAKLALLCKKEAKEGNEQQSLFDGRREKPKALKMREAMFQSIEQQLEYTKIQEEVYERL
LPVITGALDEDSAVELLMNEFGQGRLKDRPAHQAILKEGFENLVQHKVIDAALMIDILTL
MNADDSEEGTTLLGGDEFVYAFRVLVVSWQNIHRTTREGLLKLVWKRLAIKDDWATINNT
RDITDTRITDVLRDTAVSWTFRALFRMCAENPFARIVWPKSLRDLLGAGGTHGELCVRFA
AEDLREPIIRDNLLDDDILQEHLEKNRLSDWFKEAWKAGRAMYDEELVLEGKAQAAPAEP
ETMVNGAGAETEAEAEIEAEAAGSDTFDGDDESALEQERDVEMLES
NT seq 4101 nt   +upstreamnt  +downstreamnt
atgttttcgccagaggcttcgatccagagcgcgcgcagctccctgcgcaatccccgacgc
cgccagcgcaaggactcggacggcccccagcagcaacggagccggaagcgcagtaagctc
aacgatgaagccttcaaggacccagccggcgcgcacatgaatggaaatgggagcgttcag
attaatggccatgcagttcagagcgtcgagaattccgttgttctggttgacatgcccgtc
cgcgagaagaagacagcaccgaagcagcgcgcgcccaaagaagagactggttcatatctt
acaaaaaacgcaaactacagcgtaaagaaactccccggttttccatcagcgcttctccgc
ccttcgacccccatatatgcaaccgcactcccctcggctggtctcgcactcgccctgact
tcggatcgagccctcatctgggactacagcgccccgaacggccctacaaaggtcgtctcc
ttaaatctgggctttggcctaagaccatccgagcctctgccactaggtgccatcgtgcgc
aacggccccacaaacgacttcggtgtcgtcgcactcgcgccttcgacaggcaaaatcagt
ttctgggagagcatcgacagcgccgatacccgaagcctctatccccagcgccaacaagga
gtggagggcttcgtcaagctatactctggagaaaccataaccgacctggtagacgtcgag
catgcgggctatgtcctggtcttcagcagcggcaggttggctcaacttaccctgcgcgac
tcgcaaggcaggcccaacgttgtaaccaccgttttgagcgcgcccaacagttcgggtggt
agcttcttcagcctcaagggcctgttgggaggatcgattcgcaaaaccattgcctcagtc
aaggcccgtacttcgcagtcaaaaggccacatggatgtcatatctgcaacaaagaacggt
ctctttcagctttgggatttgagctggtcaggacaacatagccatcatcgggatgtggat
gtacacgatacaattctttcggtgctccaggttaacacagtgccggagatacgcaatcag
caggatgtgcatgtgctggactttgcaatcgtcgaacaacagcagaggcatgacgttgtt
gagcttctcgtgttggtggccttgtctggtcgagattcgatggattattctctcctcgaa
ctggtcttatcaggagctgggggcacagtcaacagggtgattccgcttcgcaactttcac
caaccccaactaccaaaggagcccaccggaaccctgttggtcccgcaacccggacacacc
gcgtatgttcagttcccaggcgccatgtgtgtgactgccctcacccgacccgaagaaagc
cctgaagcacaactactggcagatgccggacgacccagcctgccttttcaggacacaata
tacttccgcccagatgtaacgatatctggaaatgccctggagatagcactacgaaaagac
agacgagcgaccgcactcatctttgtccaacaattcggacttttgcagatcagtgcgcta
tcacccactacggacgaacaggataatgagcgagctaaggtcacggcactcagcaaactt
gagcaagcgacattcttcagcactattcctggcaacattattgacttttccgtgaagtca
cggttttcgtttccagaagaagagactgcggaggcggcgcgtgccattagcgctggtatt
ttgagctcgtcctacgactacctggagaagagcacctcaaacatggacgaacaattccag
caacgcactagcgccctgcaaactttgatctcgcaactgcaaagcaattacccaccgctg
tcttttgatacaaagtggcggctcctttggcacgcggaaaagttaacggctgcacataag
ctgtggaattggtaccaggacaaactgcaggatcagcaagctcatccagacgcgtatccg
gaaaagattctaatgagcgatatcattagagccctgaatgagcgctacaagacgcccatc
gaccctgagcttggcgagaccgataccatccgacaattcttcctcaaggatgtcgactct
ctgggtgtattgattccttggggctggttctacctgcgaaccttttatatgaaagagggc
gcaaaggaacaggggtcgattatgcagaggctcagtgagggtactgatgtcatgcttgtg
gctttggaggctgcttttaagtttcggcaagccaatgtggaactgtatgggctcgatggt
gattgcctcgacgacggcattctcagaccagaagaaggctacgacctgcttccccagttc
tggacgtcgtctcacaacattgtcagctcaattcgtagcctcattgacgttggccggaat
ctcgcggtggaaaactacgaagaaggctaccaagagattcttgcgcaaaagattggcaaa
gacaatcctcgcctggtgaagctgggttgtcaaacgcatatcgaacgcttccaatgggct
cttgcgcagagtgacgagaagacgcgagcaatgggccgcagcctcaaggacgaatggaac
aacaatgtccgaccatcgcacattatgggcttgatggagattgggctcgcaacagaagga
atgaagctggctgaacagtaccgggatatgcccacgctggtgagcctcatttgggaagag
acgaactggctcgaatcagaaaaggcgagcacacgcagcaagatggagcaggcggaaagc
acagtcaagctcaacaggatcaaggagcgtatcgcgcgctactttgccatctacggcgac
gagtgggctggagctttctacaacaagtacattaccgagaaccaagcgggccagctgttc
atgaaagactacctcaaccaaccagcgcttaccaagtttttgcgctccgaaccttcgcgc
gtgcggctcgcgtggatcaacgatgtgtgcggcgagaaggattacgaggccgcagctgag
gcactgtacgaggctggttcgaagcaggagactaactcgtggtgtcagcgtgtggagctg
tccatggccaagctcgctctcctgtgcaagaaggaggcgaaggagggcaacgaacagcaa
tcactgtttgatgggcgccgggagaagccaaaggctttgaagatgcgcgaagccatgttt
cagagcatcgaacagcagttggagtacaccaagatccaagaggaagtctacgagcgactg
ctccccgtcatcacgggtgctctagacgaggactctgccgtcgaactgttgatgaatgag
tttggtcaaggccgtctcaaggacaggccagcgcatcaggcgattctcaaggaaggcttt
gagaatcttgtgcagcacaaggtgattgatgcggccctcatgattgacattcttacattg
atgaatgcggatgacagcgaggagggtacgactctgctgggaggagacgagttcgtctac
gcctttagagttctggttgtgagctggcaaaacattcatcgaacgacacgcgaaggccta
ctgaagctggtgtggaagcgattggctatcaaagatgactgggctacgatcaacaacacg
agggacattacggacactaggatcactgatgtgctccgggatactgcagtatcatggaca
ttccgggccttgttcaggatgtgtgccgagaacccatttgctcggattgtatggcccaag
agcctgcgggatcttctgggagccgggggtacgcatggcgagctttgcgtgcgctttgca
gccgaggatctccgcgagcccattatcagggacaacctgcttgacgacgatattctacaa
gagcacttggagaagaacaggcttagtgactggttcaaggaagcatggaaggcgggcagg
gcaatgtatgacgaggagctagtgctcgagggcaaagcgcaagcggcgcctgccgagccc
gagacgatggtcaatggggcaggggcagagacagaagcagaggcagagattgaggcagaa
gcagcagggtcggatacatttgatggagacgatgagagcgcgttagagcaggaacgcgat
gttgagatgttggagtcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system