KEGG   Bipolaris sorokiniana: COCSADRAFT_39035
Entry
COCSADRAFT_39035  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K14004  protein transport protein SEC13
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03013  Nucleocytoplasmic transport
bsc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCSADRAFT_39035
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    COCSADRAFT_39035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsc03019]
    COCSADRAFT_39035
   04131 Membrane trafficking [BR:bsc04131]
    COCSADRAFT_39035
Messenger RNA biogenesis [BR:bsc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     COCSADRAFT_39035
Membrane trafficking [BR:bsc04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    COCSADRAFT_39035
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    COCSADRAFT_39035
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    COCSADRAFT_39035
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Kelch_6 DUF295 Kelch_3 IKI3
Other DBs
NCBI-GeneID: 19139403
NCBI-ProteinID: XP_007702555
JGI: Cocsa1_39035
UniProt: M2S255
Position
Unknown
AA seq 298 aa
MANVIANSGHDDMIHDAVLDYYGRRLATCSSDKTIKIFEVEGDKHTLVETLRGHEGAVWS
VAWAHPKYGNILASSSYDGKVLIWREQSNSWQKIYEVALHTASVNLVAWAPHEAGCLLAC
ASTDGNVSVLEFKDNNWTHQLFQAHGSGVNSVSWAPAIAPGQVASGGGNQAAARRLVTGG
SDCQVKIWEFSPDSGSWQNLQILPGGHQDWVRDVAWSPTVLSKSYIASASQDKTVIIWTS
SDLRGEWKRTKLDVEAAAWRVSWSLSGNALAVSTGDNRVSLWKERLSGGWECVKTIEE
NT seq 897 nt   +upstreamnt  +downstreamnt
atggccaacgttatagccaactcgggccacgatgatatgatacatgatgctgttctggac
tactatggccgacgattagcgacttgttcttcggacaagacgatcaagattttcgaggtc
gaaggcgacaagcacacattggtagagacactcagaggacacgaaggtgctgtatggagt
gtcgcatgggcacacccaaagtacggcaacatcctcgcctcctcttcgtacgacggcaag
gtcctcatctggcgcgagcagtccaacagctggcagaagatttacgaggtcgctcttcac
actgcctcggtcaaccttgtcgcatgggcaccccacgaggcaggctgcctactcgcatgt
gcttccaccgacggcaacgtctccgtactcgaatttaaggacaacaactggacacatcag
cttttccaggctcatggaagtggcgtcaacagcgtatcctgggctcctgctattgcgcct
ggacaagtcgccagtggaggcggcaaccaagcggctgccaggcggctggtgaccggtgga
agtgactgccaggtcaaaatatgggaattcagccccgacagcggcagctggcaaaacctg
cagatactccctggtggtcaccaggactgggtgcgcgacgtagcctggtcacccaccgtt
ctatcaaagtcatacattgcctctgcctctcaggataaaactgtcatcatctggacctct
tcggacttgcgaggcgaatggaagcgcactaagctagatgttgaagccgccgcctggcgt
gtcagttggagcttgagtggcaacgccttggccgtgagcactggcgacaacagggtcagt
ctctggaaggagcggctcagtggcggatgggagtgcgtcaagacaattgaggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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