KEGG   Bifidobacterium scardovii: BBSC_1959
Entry
BBSC_1959         CDS       T03975                                 
Name
(GenBank) putative ABC transporter permease and ATP-binding components
  KO
K18888  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
bsca  Bifidobacterium scardovii
Pathway
bsca02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:bsca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    BBSC_1959
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bsca02000]
    BBSC_1959
Transporters [BR:bsca02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    BBSC_1959
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_22 AAA_30 TsaE AAA_21 Ndc1_Nup
Other DBs
NCBI-ProteinID: BAQ32039
Position
complement(2352467..2354482)
AA seq 671 aa
MSNDQSFKNRKPAMGKAEPGTIKRIFGYIFQYKWRVIAIVACILIGAAAQAGSALFLQSL
IDTYILPMVGESNPDWAPLLRAITFMGCLYVAGIVASWAWQWLIVTVEQGTLKKIRDDMF
AHQQKLPIRYFDSHEHGDIMSHYTNDTDTLRQAISQSFPQMFSSIISAIAALLSMLWLSI
PFTAFVIVFTVLLYFIVRKIVSRSGRYFVKQQVWIGDVNAFVEESVNGQKVIKVFNHEDA
TQKTFDEKNEELFEASAEANTWGNVTMPVVGNMGYLLYILLAIIGAAVSLAGVNDIGLTG
VKPLTLGTLVSLLTLSRSFINPIGQVSQQLTMVMMALAGASRIFKLMDEPIESDNGTVTL
VNVELGEDGRTMKEVDRETGHWAWKREAGDDGTRSLKAAEKLRGSARDVAMKAKEQAITS
PDGRYTLLRGDVRFTNVTFGYNPDKPVLHDITWFAKPGQKIALVGATGAGKTTVTNLINR
FYDIQEGQILYDGISVAGIKKPDLRRSLGIVLQDVNLFTGTVMDNIRYGRLNATDAECIE
AARLVNADGFIRMLPKGYDTILEGDGSGLSQGQRQLISIARAAVADPPALILDEATSSID
TRTEEVVQAGMDNLMKGRTVFVIAHRLSTVRNSDVIMVLDHGNIIERGSHDELIAQRGEY
YQLYTGAVELE
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgagcaacgaccagagcttcaagaaccgcaagcccgccatgggcaaagccgaacctggc
accatcaagcgcatcttcggctatatcttccagtacaagtggcgcgtcatcgccatcgtg
gcgtgcatcctgatcggcgccgccgcgcaggccggttccgcgctgttcctccagtcgctg
atcgacacctacatcctgccgatggtgggggagtcgaacccggactgggcgccgctgctg
cgcgcgatcacgttcatgggctgcctgtacgtggccggcatcgtggcgtcctgggcctgg
cagtggctgatcgtcaccgtcgagcagggcacgctgaagaagatccgcgacgacatgttc
gcccaccagcagaagctgccgatccgctatttcgacagccatgagcacggcgacatcatg
agccactacacgaacgacaccgatacgctgcgccaggcgatctcgcagtcgttcccgcag
atgttctcctcgatcatctccgcgatcgcggcgctgctgtccatgctgtggctctcgatc
ccgttcaccgcgttcgtgatcgtgttcaccgtcctgctctactttatcgtgcgcaagatc
gtgagccgctccggccgctacttcgtcaagcagcaggtgtggatcggcgacgtgaacgcc
ttcgtggaggagtccgtcaacggccagaaggtcatcaaggtcttcaaccacgaagacgcc
acccagaagaccttcgacgagaagaacgaggagctcttcgaggcgtccgccgaggcgaac
acctggggcaatgtcaccatgccggtcgtcggcaacatgggctacctgctgtacatcctg
ctcgccatcatcggcgccgccgtctcgctggccggcgtcaacgacatcggcctgaccggc
gtcaagccgctcaccctcggcacgctcgtctccctgctgaccctgtcccgctcgttcatc
aacccgatcggccaggtctcccagcagctgaccatggtgatgatggcgctcgctggcgcc
tcgcgtatcttcaagctgatggatgagccgatcgagtccgacaacggcaccgtcaccctc
gtcaacgtcgaactcggcgaggacgggcgcacgatgaaagaggtcgaccgcgagaccggc
cactgggcgtggaagcgcgaggccggcgacgacggcacgcggtccctgaaggccgccgag
aagctgcgcggttccgcccgtgacgtggcgatgaaggccaaggagcaggcgatcacctcg
cctgacgggcgctacacgctgctgcgtggcgacgtgcgcttcaccaacgtgaccttcggc
tacaacccggacaagccggtgctgcacgacatcacctggttcgccaagcccggccagaag
atcgcgctcgtcggcgcaaccggcgccggcaagaccacggtgaccaacctcatcaaccgc
ttctacgatatccaggaagggcagatcctgtacgacggcatctccgtggccggcatcaag
aagcccgacctgcgccgctcgctgggcatcgtgctgcaggacgtgaacctgttcaccggc
accgtgatggacaacatccggtacggccgcctgaacgccaccgatgcggagtgcatcgag
gccgcgcgcctggtcaatgcggacggcttcatccgcatgctgcccaagggctacgacacg
atcctcgagggtgacggctccggcctgtcccaaggccagcgccagctgatctccatcgcg
cgcgccgcggtggccgacccgccggcgctgatcctcgacgaggccacgtcgtcgatcgac
acccgcaccgaggaggtcgtgcaggccggcatggacaacctgatgaagggccgtacggtc
ttcgtcatcgcccaccgcctgtccaccgtgcgcaactccgacgtgatcatggtgctcgat
cacggcaacatcatcgagcgcggctcgcacgacgagctgatcgcgcagcgaggggaatat
taccagctttacacgggtgccgtggagctggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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