KEGG   Bacillus selenitireducens: Bsel_1794
Entry
Bsel_1794         CDS       T01243                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bse  Bacillus selenitireducens
Pathway
bse03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bsel_1794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bse03019]
    Bsel_1794
   03016 Transfer RNA biogenesis [BR:bse03016]
    Bsel_1794
Enzymes [BR:bse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Bsel_1794
Messenger RNA biogenesis [BR:bse03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Bsel_1794
Transfer RNA biogenesis [BR:bse03016]
 Prokaryotic type
  tRNA degradation factors
   Bsel_1794
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 SPATA25 DUF2110
Other DBs
NCBI-ProteinID: ADH99301
UniProt: D6XU15
Position
1988045..1990147
AA seq 700 aa
MSEESKVYSMEWAGRTLSFEVGKYAKQANGAVMVKYGDTTVLSTATGSKEPKDLPFFPLT
VNYEERLYAAGKIPGGFIKREGRPSDNAVLTSRLIDRPIRPLFPDGYRNDVQVISIVMSS
DQNASSEMAAMIGSSMALSISDIPFGGPIAGVTVGRVNGEFIINPTTTQMADSDIDLIVA
GTKDAVNMVEAGAEQVPEEDMMDAILFGHDEIKRLVAFQEEIIAEVGKPKMEVQLLTTDA
DLETELREKAYGKLTEAAKVVEKAAREDAISDVYDEIMLDYVTEQPEEDRSKEVKEILNK
LLKETVRELITKENIRPDGRKVDEIRPLSSEVDILPRAHGSGLFTRGQTQALSVCTLGAL
GDVQILDGLGIEESKRFMHHYNFPQFSVGETGPIRGPGRREIGHGALGERALEQVIPSEK
DFPYTIRLVSEVLESNGSTSQASICASTMAMMAAGVPITSPVAGIAMGLVKHGEDMTVLT
DIQGMEDALGDMDFKVAGTKDGVTALQMDIKIEGINREVLKSALEQARDGRLKILDNMLS
AIPEPRDELSEYAPKIKTMNIHPDKIRDVIGPSGKIINKIIEETGVKIDIEQDGTVFISG
LDVDMIHKALSTIEEIVREVEVGETYLGKVKRIEKFGCFVEIFKGKDGLVHISQLANERV
GKVEDVVSIGDELLVKVTEIDNQGRVNLSRKAVLNEEAKK
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgagtgaagaatcaaaagtgtattcaatggagtgggcaggcagaacgctgtccttcgaa
gtagggaagtatgccaagcaggcaaacggtgcagtcatggtgaaatacggagacacaacc
gtcctttccacagcaaccggttccaaggaacccaaggacctgccatttttcccgctgaca
gtcaattatgaagaacgtctttatgcagcaggaaaaataccgggcggtttcatcaaacgc
gaaggccgtccaagtgacaatgcggttctgacctcccgtttgatcgatcggccgatccgt
ccattatttccggatggctacagaaatgatgtccaggttatcagcattgtgatgagcagt
gatcaaaacgcctcttctgaaatggcagcgatgatcggttcatcgatggcgctgtctatc
tctgatattccattcggcggaccaattgcaggtgttacagtcgggcgtgttaatggtgaa
ttcatcattaatccgacaacgactcaaatggcagacagtgatattgatctgattgttgca
ggtacgaaggatgcggttaacatggttgaagccggggccgagcaagtcccggaagaagac
atgatggatgcaatcctgtttggacatgatgagatcaagcgccttgtcgcatttcaagaa
gagatcattgccgaggttggcaaaccgaaaatggaagtgcagcttttaacaacagatgca
gacttggaaaccgagctgcgtgagaaagcatacggcaaattgactgaagctgcgaaggtc
gttgagaaagcagctcgtgaagatgcgatttcagacgtttatgatgaaattatgcttgac
tatgtaacagagcaaccagaagaagaccgatcgaaagaagtaaaagaaatactgaataaa
ctgctgaaggaaacggtaagagaactcattaccaaagaaaatatccgtccagatggccgg
aaggttgatgaaatccgtcctctttcttcagaagtcgacattcttccgagagctcacggt
tccggtcttttcacacgaggtcagacgcaggcattaagcgtatgtacactcggtgcgttg
ggtgacgtacagatccttgacggcttgggtatcgaagagtcaaaacggttcatgcatcac
tacaacttcccgcagttttctgtcggtgaaaccggcccaatccgtggcccgggacgtcgt
gaaatcgggcatggtgcattgggtgaacgtgctcttgaacaggtaatcccttctgaaaaa
gatttcccgtatacaatcagacttgtctctgaagtactcgaatcaaacgggtctacatca
caggccagtatttgtgcatccacgatggcgatgatggcagcaggtgttccaattacatca
ccggttgcagggattgcgatgggacttgtaaagcacggtgaagacatgacggtccttact
gacattcagggtatggaagatgctcttggcgacatggacttcaaggttgccggaacgaaa
gacggcgttacagcccttcagatggatatcaagatcgaaggcattaatcgtgaagtctta
aaatcagctcttgaacaggcccgtgatggacgcttgaagattcttgataacatgctttct
gctattcctgagcctcgcgatgagctgagcgaatatgcaccaaagatcaagacgatgaat
attcatccggataagatccgtgatgtaatcggacctagtggtaagattatcaacaagatc
attgaagaaaccggagtgaagatcgacatcgagcaggatggtaccgtatttatttccgga
ctggatgttgacatgatccataaagcgctgagcacgatcgaagaaatcgttcgtgaagtg
gaagttggcgaaacgtatcttggtaaagtaaagcgaattgagaagttcggttgctttgtg
gagatctttaaaggaaaagatggccttgtccatatttcacaactcgcaaatgagcgagtc
ggaaaagtggaagatgtcgtttccattggagatgaactgctcgttaaggtaacagaaatt
gataaccagggacgtgtcaatctgtcccgcaaagcggttcttaacgaagaagcgaagaaa
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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