KEGG   Burkholderia seminalis: WJ12_00585
Entry
WJ12_00585        CDS       T04851                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
bsem  Burkholderia seminalis
Pathway
bsem03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    WJ12_00585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsem03400]
    WJ12_00585
Enzymes [BR:bsem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     WJ12_00585
DNA repair and recombination proteins [BR:bsem03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     WJ12_00585
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII Helicase_C PriA_CRR AAA_16 AAA_19 ADDB_N zinc-ribbons_6
Other DBs
NCBI-ProteinID: AOJ23444
Position
1:133849..136110
AA seq 753 aa
MSGTYLRVALDHPLATLFDYRCDAQPAPVPGTLVQVPFGKRQAVGLVCEVTTHTDVPPSR
LRAVDAICADLPPLSADWLALVSFAADYYQRGRGEVALPALPQALRDAGRWGRLLAPEVR
YQPTEAGRAALPDALPARGAALRRLAQALVNTGSLTLPDARVLHPKAAATLDDWAARGWV
DVEEIGWADAPVPKAVDNLSTTGGRTVPPALTDQQAEALDAIRAAAGFAPFLLHGVTGSG
KTEVYLHALASLLDARPDAQALVLVPEINLTPQFEAAFRARFAGALADDAIVTLHSGLAE
GERARNWLAAHTGRARIVLGTRLAVLASMPTLALIVVDEEHEPAYKQQEGLRYSARDLAV
WRAKQLGITVVLGSATPSLESWWQAEQGRYTKLTLSRRAVADATLPTVRLIDLEEERRRG
RASMGGLSGPLVAALKARLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHK
PEHALRCHHCGWEARIPRSCPECGNVDIAPLGRGTQRIEEALAEAVPGARVLRIDADSTR
RKGSAQALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFA
QLMQVSGRAGRAGLPGEVMVQTRYPRHALYHALGRQDYVGFANSTLGERRDAHLPPFVYQ
ALLRAEGRTLDAALAFLLQAAAALPGLPGADRVTVYDAVPMTIVKVANVHRAQLLLESAS
RAALQHALRAWQPALRALKGVLRWSVEVDPLDI
NT seq 2262 nt   +upstreamnt  +downstreamnt
atgagcggcacctacctgcgcgtcgcgctcgaccatccgctcgcgaccctgttcgactac
cgctgcgacgcgcagccggcacccgtgcccggcacgctcgtgcaggtgccgttcggcaag
cggcaggccgtcgggctcgtttgcgaagtgacgactcacaccgatgtgccgccgtcacgg
ctgcgcgcggtcgacgcgatctgcgccgacctgcccccgctgtcggcggactggctcgcc
ctggtgtcgttcgccgccgactactatcagcgcgggcgcggcgaggttgcgctgccggcg
ctgccgcaggcgctgcgtgacgccgggcgctgggggcggctgctcgcgcccgaagtgcgc
taccagccgaccgaagccggccgcgcggcgttgcccgatgcattgcccgcgcgcggcgcc
gcgctgcggcggcttgcacaggcgctcgtcaataccggttcgttgacgctgcccgacgcg
cgggtgctgcatccgaaggcggccgcgacgctcgatgactgggccgcgcgcggctgggtc
gacgtcgaggagatcggctgggccgatgcgcctgtgcccaaagctgtggataacctgtcg
acaaccggtggacgaaccgtgccgccggcactgaccgaccagcaggccgaggcgctcgac
gcgatccgcgcggcagcgggcttcgcgccgttcctgctgcacggcgtgacgggcagcggc
aagaccgaggtctatctgcatgcgctcgcgtcgctgctcgatgcacggccggacgcgcag
gcgctcgtgctcgtgcccgaaatcaacctgacgccgcagttcgaggccgcgtttcgcgcg
cgcttcgcgggggcgctcgccgacgacgcgatcgtcacgctgcacagcgggctcgccgag
ggcgagcgggcgcgcaactggctggccgcccacacgggccgcgcgcggatcgtgctcggc
acgcgcctggcggtgctggcgtcgatgccgacgctcgcgctgatcgtcgtcgacgaggag
cacgagccggcgtacaagcagcaggaagggctgcgctattcggcgcgcgatctcgccgtg
tggcgcgccaagcagctcggcatcacggtcgtgctcggctcggccacgccgtcgctcgaa
agctggtggcaggccgagcaggggcgctatacgaagctcacgctatcgcgccgcgcggtg
gccgacgcgacgctgccgaccgtgcggctgatcgatctcgaagaggagcgacggcgcggc
cgcgcgtcgatgggcgggctgtcggggccgctcgtcgcggcgctgaaggcgcggctcgaa
cgcggcgagcagagcctcgtgttcctgaaccggcgcggttacgcgccgcagctcgcgtgc
gacgcatgcggctgggtcgccggttgtccgcgctgcagcgcgtacgtcgtcctgcacaag
cccgagcatgcgctgcgctgccatcactgcggctgggaggcgcgcattcctcggtcgtgt
ccggagtgcgggaacgtcgacatcgcgccgctcgggcgcggcacgcagcgtatcgaggag
gcgctcgccgaggccgtgccgggcgcgcgggtgctgcggatcgacgcggacagcacgcgc
cgcaagggcagcgcgcaggcgctgttctccgacgtgcatgcgggcgaggtcgacatcctg
gtcggcacgcagatgatcgcgaaggggcacgactttcagcgcgtgtcgctcgtcggcgtg
ctcaatgccgacaccgcgctgttttcgcacgatttccgggcgagcgaacggctgttcgcg
cagttgatgcaggtgagcggccgcgcggggcgggccgggctgccgggcgaggtgatggtg
cagacgcgttacccgcgtcatgcgctgtatcacgcgctcgggcggcaggattacgtcggc
ttcgcgaattcgacgctcggcgagcgccgcgacgcgcacctgccgccgttcgtctaccag
gcgctgctgcgcgccgaagggcgcacgctcgacgcggcgctcgcgttcctgcttcaggcc
gcggccgcattgccggggctgccgggcgccgatcgcgtgaccgtgtacgacgcggtgccg
atgacgatcgtcaaggtcgcgaacgtccatcgcgcgcagttgctgctcgaaagcgcatcg
cgggcggcgctgcagcatgcgctgcgtgcatggcagccggcactgcgggcgctgaagggc
gtgctgcggtggagcgtcgaagtcgacccgctggatatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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