KEGG   Bacillus subtilis subsp. spizizenii W23: BSUW23_17870
Entry
BSUW23_17870      CDS       T01302                                 
Symbol
ssbB
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
bss  Bacillus subtilis subsp. spizizenii W23
Pathway
bss03030  DNA replication
bss03430  Mismatch repair
bss03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSUW23_17870 (ssbB)
   03430 Mismatch repair
    BSUW23_17870 (ssbB)
   03440 Homologous recombination
    BSUW23_17870 (ssbB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bss03032]
    BSUW23_17870 (ssbB)
   03400 DNA repair and recombination proteins [BR:bss03400]
    BSUW23_17870 (ssbB)
   03029 Mitochondrial biogenesis [BR:bss03029]
    BSUW23_17870 (ssbB)
DNA replication proteins [BR:bss03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BSUW23_17870 (ssbB)
DNA repair and recombination proteins [BR:bss03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     BSUW23_17870 (ssbB)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    BSUW23_17870 (ssbB)
Mitochondrial biogenesis [BR:bss03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    BSUW23_17870 (ssbB)
SSDB
Motif
Pfam: SSB tRNA_anti-codon DUF4222 Diphtheria_R
Other DBs
NCBI-ProteinID: ADM39609
UniProt: E0TU03
Position
complement(3534308..3534649)
AA seq 113 aa
MFNQVMLVGRLTKDPELRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAEN
TALYCQKGSLVGVSGRIQTRSYENAEGVPVYVTEVLADTVRFMDPKPREKAAD
NT seq 342 nt   +upstreamnt  +downstreamnt
atgttcaatcaggtcatgcttgtcggacgtcttacaaaagatcctgagcttcgctacact
tccgccggtgcggcagtcgcacacgttacgctcgcggtaaaccgcagcttcaaaaatgct
tcaggtgaaatcgaggccgattacgtcaattgcacactttggagaaaaacagctgaaaac
acggcgttatattgccaaaaaggttctctcgtcggcgtaagcggacggattcagacaaga
agctatgaaaacgcagaaggcgttcccgtctatgtaacggaagtgttggctgacactgtt
cgttttatggaccctaaaccccgggaaaaagctgccgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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