KEGG   Burkholderia stabilis: BBJ41_02845
Entry
BBJ41_02845       CDS       T04946                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bstl  Burkholderia stabilis
Pathway
bstl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bstl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBJ41_02845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bstl03021]
    BBJ41_02845
   03019 Messenger RNA biogenesis [BR:bstl03019]
    BBJ41_02845
Transcription machinery [BR:bstl03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BBJ41_02845
Messenger RNA biogenesis [BR:bstl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BBJ41_02845
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB ATPase_2 AAA_22 AAA_25
Other DBs
NCBI-ProteinID: AOR66584
UniProt: A0A1D7Z9N5
Position
1:complement(590628..591890)
AA seq 420 aa
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcatttatccgagctcaagtctctgcacgtctccgaactgatcgaaatggccaatggc
ctcgagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgttcgccattcttaaa
aagcgcgccaagacgggagagacgatcttcggcgacggtacgctcgaagtgctgccggac
ggcttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctat
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacaccatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgaacgcgaaatgcgcggcgaggaaaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctcgtcgcatcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcgcacgcgatcaagcagaaccacccg
gacgtgatcctgttcgtgctgctgatcgacgagcgccctgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcatcgacgttcgacgaaccggccacgcgtcacgtc
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgaaatgaagcacgacgtc
gtgatcctgctcgactcgatcacgcgtctcgcacgcgcatacaacaccgtgatcccggca
tcgggcaaggtgctgacgggcggtgtcgacgcaaacgcgctgcaacgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggttcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtgtatccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaggaaatgctgatcaagcccgagatccttcagaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggcaatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgacctgatgcgccgcggcggc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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