KEGG   Bacteriovorax stolpii: C0V70_00020
Entry
C0V70_00020       CDS       T05263                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
bsto  Bacteriovorax stolpii
Brite
KEGG Orthology (KO) [BR:bsto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsto03032]
    C0V70_00020 (gyrB)
   03400 DNA repair and recombination proteins [BR:bsto03400]
    C0V70_00020 (gyrB)
Enzymes [BR:bsto01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     C0V70_00020 (gyrB)
DNA replication proteins [BR:bsto03032]
 Prokaryotic type
  DNA Topoisomerases
   C0V70_00020 (gyrB)
DNA repair and recombination proteins [BR:bsto03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      C0V70_00020 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_insert GyrB_hook HATPase_c_3 Toprim_4 Utp13
Other DBs
NCBI-ProteinID: AUN96516
UniProt: A0A2K9NLY0
Position
4521..6974
AA seq 817 aa
MENNQSESISKVNTEYGSNQIKVLEGLDAVRKRPGMYIGDTGIRGLHHCVYEIVDNSVDE
ALAGYCTDINVVIHIDNSVTVVDNGRGIPTDIHPTEGISGAELAYTKLHAGGKFNEDGGA
YKVSGGLHGVGAAVVNALSKWVKLEIKKYGKLHELNFDHGKATDKIKEIGVLENPKETGT
KVTFKPDNEIFEFHEFNYDTLANRFREMAFLNRGLKISLKDERSEKSDLFYFEGGISEFV
NYLNRAKTAIHKKVIYFVQTKDDYEAEIAMQWTDSYNEVITSYANNISTPEGGTHVSGFK
TALTRVLNNYAKDNNLLKNIKIALTGDDMREGLTAVVSVKLKEPQFEGQTKSKLGNSEVE
GIVNSLVGESFKTFLEENPEIGKMVIKKSVDAAAAREAARRARELTRRKNVLEFSGLPGK
MADCQESDPAQCELYIVEGDSAGGSAKQGRDRRVQAVLPLKGKILNVEKARYEKMLASEE
IKNLIQALGTGVGKDTFNIAKLRYHKIVIMTDADVDGSHIRTLLLTLLYRQFPELIEQGY
IYIAQPPLYKYKKGKMETYLKDDKRLEEYLINNATDDSKISINGELVSGDSAKQLINKES
MYRKTLSYYDTHYDSDLLRRLIEDGMLRAEDMSDKAKVEAEAKRLTDFFKPLETETLKQY
SITVEEDYDTKTFSLRLNIKTASRTKRFKISPGFLRSPEFADLVNSFDGIKKYSKATFKI
EREKDTREFASLTAFSEFVIADGKQGAYIQRYKGLGEMNPEQLWETTMNPSNRTLLQVRI
EDTLEADQVFTVLMGDQVEPRRKFVEENALNARNLDV
NT seq 2454 nt   +upstreamnt  +downstreamnt
ttggaaaacaatcaatccgaatcaatctcaaaagtaaacactgagtatggatcaaaccag
attaaagttcttgaaggacttgatgccgtaagaaagcgtcctggtatgtacattggtgat
actggtatccgtggtcttcaccactgcgtgtacgaaattgttgataactctgtagatgag
gcccttgctggttattgtacagacatcaacgttgttattcacatcgataactcagttacc
gttgttgataacggccgtgggatccctactgacattcaccctacagagggaatttcagga
gcggaacttgcgtatacaaaacttcacgccggtggaaagttcaacgaagacggaggagct
tacaaagtttctggtggtcttcacggtgtaggtgctgcggtagtaaatgccctttcaaaa
tgggtaaaactagagattaaaaaatacggaaagcttcacgaattaaattttgatcacggt
aaagcgactgacaaaattaaagaaatcggtgtgcttgaaaatccaaaagaaactggaacg
aaagttactttcaaaccagataacgaaattttcgaattccacgaattcaactacgataca
ctggctaaccgtttccgcgagatggccttcttaaatcgtggtcttaaaatttctcttaaa
gacgaacgttcagaaaaatcagatctattctatttcgaaggtgggatttctgaattcgta
aattacctaaacagagctaaaacagcgattcataaaaaagtaatctatttcgtgcagaca
aaagacgattacgaagcagaaattgctatgcaatggactgactcgtacaacgaagtcatc
acttcatacgctaacaacatctcgactccagaaggtggtacacacgtttctggatttaag
acagctcttactcgtgtacttaataactacgccaaagataataaccttctaaaaaacatc
aaaatcgctcttacgggtgatgatatgagagaaggtttaactgctgttgtttcagtgaaa
ctaaaagagccacaatttgaaggtcagacgaaatcaaaacttggtaactcggaagttgaa
gggattgttaactcacttgtgggtgaatctttcaaaactttcctggaagaaaacccagaa
attgggaaaatggttatcaaaaaatctgtggatgccgctgctgctcgcgaagctgcaagg
cgtgcacgtgaacttactcgtcgtaaaaacgttctagaattctctggtcttccagggaaa
atggcagactgtcaggaatcagatcctgctcagtgtgaactatacatcgtagaaggggac
tctgcgggcggatcggcaaaacaaggtcgcgatcgcagagtacaagctgttcttccgcta
aaaggtaaaattcttaacgttgaaaaagctcgttatgaaaaaatgctggcttcagaagag
attaaaaacctgattcaggccctagggactggtgttgggaaagacacgtttaacattgcg
aaacttagataccacaaaatcgttatcatgaccgatgccgacgtcgatggatcgcacatt
agaactcttcttcttactctactctaccgtcaattcccggagcttattgagcaagggtat
atctacatcgctcaaccacctctttataaatacaaaaaagggaaaatggagacgtactta
aaagacgataaacgccttgaagagtacctgattaacaatgcaactgatgattcaaaaatt
agtatcaatggagaactagtttctggagattcagctaagcagttaatcaacaaagaaagc
atgtacagaaaaactctttcttactacgacactcactatgattcagaccttttaagaaga
ctgattgaagatgggatgcttagagctgaagacatgagcgataaagcaaaagttgaagct
gaagctaagagacttactgatttcttcaagccgcttgagactgaaacactaaagcagtac
tcaattacagttgaagaagactatgacacaaaaactttctctctgcgcttgaacatcaaa
acagcttcaagaacaaagagattcaaaatcagcccgggcttcttaagatcgccggaattt
gctgatttagttaacagctttgacggtattaaaaaatacagcaaagcgacttttaaaatt
gaacgtgaaaaagacacaagagagttcgcatcactgacggcattctctgaatttgttatc
gcggatgggaaacaaggtgcatacattcagcgttacaagggactaggagaaatgaaccca
gagcaactttgggaaacaactatgaacccttctaacagaacacttctacaagtaagaatc
gaagatacgcttgaagcggatcaggtctttacagttctaatgggagaccaggtagaacca
agaagaaagttcgttgaagaaaacgcactgaatgctagaaaccttgatgtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (56)   

Download RDF
DBGET integrated database retrieval system