KEGG   Brucella suis VBI22: BSVBI22_A2060
Entry
BSVBI22_A2060     CDS       T01706                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bsv  Brucella suis VBI22
Pathway
bsv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSVBI22_A2060 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsv03021]
    BSVBI22_A2060 (rho)
   03019 Messenger RNA biogenesis [BR:bsv03019]
    BSVBI22_A2060 (rho)
Transcription machinery [BR:bsv03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BSVBI22_A2060 (rho)
Messenger RNA biogenesis [BR:bsv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BSVBI22_A2060 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_25 AAA_22 DUF6360 AAA Spore_III_AA
Other DBs
NCBI-ProteinID: AEU07041
Position
I:complement(1991493..1992758)
AA seq 421 aa
MQEMKLQELKNKTPVELLAFAETLEVENASAMRKQELMFAILKKLAAQDVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYISPSQLRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFEDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAA
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRADLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKSNAEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaggaaatgaaactacaagaactgaaaaacaagacaccggtggagcttctggccttt
gccgagacgcttgaggtcgaaaatgcgagcgccatgcgcaagcaggaactgatgttcgcg
atcctcaagaagctggcagcccaggatgtcgaaatcatcggtgagggcgttgtcgaggtg
ctacaggacggttttggcttcctgcgctcagccgatgccaattacctacccggtccggac
gatatctatatttcgccatcgcaactgcgccgtttttcgctcaagaccggcgatacggtt
gaaggcccgatccgcgggcccaaggaaggcgagcgctattttgcgctgctcaaggtcaat
acgatcaattttgaagatccggaaaagatccgtcacaaggttcacttcgacaatctgacg
ccgctctacccaaacgagcgtttcaagatggagctggaagttccgacctcgaaagatctt
tcgccgcgtgtcatagatctggttgcgccgctcggcaaaggccagcgcggcctgatcgtc
gcgccgccgcgcaccggtaagactgttcttctccagaacatcgcccattcgatcactgca
aatcacccggaatgctatcttatcgttctcctgatcgatgagcgtccggaagaagtgacc
gacatgcagcgttcggtgaagggtgaggttatttcctcgaccttcgatgaaccggccgcc
cgccatgttcaggttgctgaaatggtcattgaaaaggcaaaacgccttgtcgaacatggc
cgtgacgtcgttatcctgctcgactcgatcacgcgccttggccgcgcctacaatacggtc
gtgccgtcttccggcaaggtgctgaccggtggtgtggacgccaatgcgctacagcgcccg
aagcgcttctttggtgctgcgcgtaacatcgaggaaggcggctcgcttaccattatcgca
actgccctgatcgataccggcagccgcatggacgaagtgatctttgaagaattcaaaggc
acgggtaactcggaaatcgttctcgaccgcaaggttgccgacaagcgcatcttcccggct
atggatattctcaagtccggtacgcgcaaggaagatctgctggttccgcgcgccgatctc
cagaagattttcgtgctgcgccgcattcttgcacccatgggcacgaccgatgcgatcgaa
ttcctcatcgacaagctcaagcagacgaagagcaatgccgaattcttcgattcgatgaat
acgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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