KEGG   Bos taurus (cow): 100126041
Entry
100126041         CDS       T01008                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bta04131]
    100126041 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bta04147]
    100126041 (COPA)
Membrane trafficking [BR:bta04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100126041 (COPA)
Exosome [BR:bta04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100126041 (COPA)
  Exosomal proteins of bladder cancer cells
   100126041 (COPA)
SSDB
Motif
Pfam: COPI_C Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 100126041
NCBI-ProteinID: NP_001099115
BGD-bta: BT16288
Ensembl: ENSBTAG00000004333
VGNC: 27592
UniProt: Q27954 A0A140T856
Structure
Position
3:9350619..9394691
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDIPPGAAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CKVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctaaccaaatttgagaccaagagtgcgcgggttaaaggactcagctttcaccccaaa
agaccctggatcctgaccagtttacacaatggagtcatccagttatgggactatcggatg
tgtaccctcattgacaagtttgatgagcatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacattgcttgggcacttagactacatccgcactacattt
tttcatcatgaatacccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aattggcagtccagaacctgtgtctgtgtgttaacagggcacaatcattacgtcatgtgc
gctcagttccacccttcagaagacctggtcgtgtcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacctgtcccctggtgcagtggagtcggat
gtgagaggaattacgggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagttaactgggctgcatttcaccctactatgccactcatt
gtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaatcaaaagcatgg
gaagttgatacctgccgaggccattacaacaatgtatcttgtgctgtcttccaccctcgt
caagagttgatcctcagcaattctgaggacaagagtatccgagtctgggacatgtctaag
cgcactggagttcagacattccgcagggaccatgatcggttctgggtcttagctgcccac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtatttaaactggaa
cgagaacggccagcctatgctgttcatggcaatatgctccattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagacgtagctgtgatgcagttgcggagtggt
tccaagtttccagtgttcagtatgtcgtacaatccagcagaaaacgcagtcctactgtgt
acaagagccagcaatttagaaaatagtacctatgacttgtataccatccccaaggatgct
gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatcta
aagaatgagatcaccaaaaaggtacaggtgcctaactgcgatgagattttttatgctggc
acaggcaacctcctgcttcgagatgcagaatccatcacgctctttgatgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccatgtagcactactggccaaacatgccattgtgatctgtaaccgcaaactggaggct
ctatgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggactacgggatc
atccgaactctggatttacctatctacgtcacgcgggtgaagggcaacaatgtatattgc
ctggacagggagtgtcgtcctcgggtgctcaccattgatcccactgagttcaagttcaaa
ctggccctgatcaacagaaaatatgacgaggtgctacacatggtgagaaatgcgaaactt
gtaggccagtctatcattgcttatcttcagaagaagggatatcctgaagtggcactgcat
ttcgtcaaggatgaaaaaactcgctttagtctggcactggagtgtggaaacattgagatt
gctctggaagcagccaaagcactagatgacaagaactgctgggaaaagctgggagaggtg
gccttactacaggggaaccaccagattgtggaaatgtgttatcagcgcaccaaaaacttt
gacaaactttccttcttgtaccttatcactggcaacctagagaaacttcgcaagatgatg
aagattgctgagatacgaaaggacatgagtggccattatcagaatgccctttacctggga
gatgtgtccgagcgggtgcggatcctgaagaactgtgggcagaagtcactggcctatctc
acagctgctacccacggcttagacgaagaagctgagagcctgaaggagacatttgaccca
gagaaggagacaatccccgacattgaccctaatgccaagttgcttcagccacctgcaccc
atcatgccgttggataccaactggcccttactgactgtgtccaaagggttcttcgagggc
tccattgccagcaaggggaagggaggcgcgctggctgctgacattgacattgacactgtt
ggtactgagggctggggagaggatgctgagctgcagctggatgaagatgggtttgtagag
gctacagaaggtttgggggatgatgctcttggcaagggacaagaagaaggaggtggctgg
gatgtggaagaagatctggagcttcctcctgagctggatataccccctggggcagctggg
ggagctgaggatgggttctttgtgcccccaaccaagggaaccagcccaactcagatctgg
tgtaataactctcagcttccagttgatcacatcctggccggctcttttgaaacagccatg
cgactccttcacgaccaagtaggggtaacccagtttggcccctacaagcaactgttcctg
cagacctatgcccgaggccgcaccacctatcaggctctgccctgcctgccctccatgtat
ggctatcctaatcgcaattggaaggatgcagggctgaagaacggtgtaccagctgtgggc
ctgaagcttaatgacctcatccaacggttgcagctgtgctaccagctcaccacagttggc
aagtttgaggaggctgtggaaaaattccggtccattttactcagcgtgccacttcttgtt
gtagacaataaacaagagattgcagaggctcagcagcttatcaccatttgccgtgagtac
attgtgggtttgtccatggagacagaaaggaagaaactgcccaaggaaactctagaacag
cagaagcgcatctgtgagatggcagcctatttcacccactcaaacctgcagccagtgcac
atgatcctggtgttgcgtacagccctcaacctcttcttcaagctcaagaacttcaggact
gctgccgcctttgctcggcgcctgttggaactcgggcccaagccggaggtggctcaacag
acccgcaaaatcctgtctgcctgtgagaaaaaccccacagatgcctatcagctcaattat
gacatgcacaaccctttcgacatctgtgctgcatcttatcggcccatctaccgtggaaag
ccagtggagaaatgtccgctcagtggggcctgctattcccctgagtttaagggtcagatc
tgcaaggtcactacggtgacagagattggcaaagacgtgatcggtttgaggatcagccct
ctgcagtttcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (63)   

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