KEGG   Bos taurus (cow): 100141289Help
Entry
100141289         CDS       T01008                                 

Gene name
USP13
Definition
(RefSeq) ubiquitin specific peptidase 13 (isopeptidase T-3)
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
bta  Bos taurus (cow)
Brite
Enzymes [BR:bta01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100141289 (USP13)
Peptidases [BR:bta01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   100141289 (USP13)
Ubiquitin system [BR:bta04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100141289 (USP13)
Exosome [BR:bta04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100141289 (USP13)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: UCH UBA zf-UBP UCH_1 UBA_4 UBA_3
Motif
Other DBs
NCBI-GeneID: 100141289
NCBI-ProteinID: NP_001178195
BGD-bta: BT16694
Ensembl: ENSBTAG00000005946
UniProt: E1BMF7
Position
1
AA seq 863 aa AA seqDB search
MQRRGALFGMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKMFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDTGYPLAVKLGTITPDGADVYSFQEEEAVLDPHLAKHLAHFGIDMLHMHG
TENGLQDNDIKPRVSEWEVIQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAESNRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSVDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMTQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIVVHMEEPDFAEPLTMPGYGGAASAGASVFG
ATGLDNQPPEETVAIITSMGFHRNQAIQALRATNSNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIVSEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
KVCASERPPKDLGYMYFYRRIPS
NT seq 2592 nt NT seq  +upstreamnt  +downstreamnt
atgcagcgccggggcgccctgttcggcatgccgggcggtagcggcagcaggaagatggct
gcaggagacatcggcgagctgctagtgccccacatgcccacgatccgcgtgcccaggtcc
ggggacagggtctacaagaacgagtgcgccttctcctacgactccccgaattctgaaggc
ggactctatgtctgcatgaatacatttttggcctttggaagggaacacgtggaaagacac
tttcgaaaaactggacagagtgtctacatgcatctgaagagacacgtgcgcgagaaggta
agaggcgcatctggtggcgctttacccaaaaggaggaattccaagatgtttttagatcta
gatactgatgacgatttaaatagcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgaaatagccctaccaaatattgaggagttaccagccctggta
accattgcttgtgatgcagttctcagctcaaaatctccatacagaaagcaggacccagat
acatgggagaatgaattgccagtgtcgaaatatgccaataaccttacccagttggacaat
ggagtcagaattcctccaagtggttggaagtgtgccaggtgcgaccttcgggagaacctc
tggttgaacctgaccgatggctccgtgctgtgtgggaagtggttctttgacagctctggg
ggcaacgggcatgcgttggagcattacagagacacaggctaccctctcgctgtgaaactg
gggaccatcactccggatggggccgatgtttattctttccaagaagaggaagctgttttg
gaccctcatttggccaagcacttagcacattttggaattgacatgcttcatatgcatggg
acagagaatgggctccaggacaacgacatcaagccgcgggtcagcgagtgggaggtgatc
caggagacggggacaaagctgaagcccatgtacggcccagggtacacagggctcaagaac
ctgggcaatagctgctatctcagctctgtgatgcaggccatcttcagcatcccagaattc
cagagagcgtatgtaggaaatcttccaagaatatttgactactctcctttagatccaaca
caagatttcaacacacagatgactaagttaggacatggccttctctcaggccagtattca
aaacctcccgtgaagtctgagctcattgaacaggtgatgaaggaggaacacaagcctcaa
cagaatgggatctctccacgcatgtttaaggcctttgtgagcaagagccacccggaattc
tcctccaacagacagcaggatgcccaggagtttttcctgcacctggtgaatctagtagag
aggaaccgcattggctcagaaaacccaagtgatgtttttcggtttttggtggaagagcgg
attcagtgctgtcagacccgaaaagtccgctacacggagagggtggactacctgatgcag
ttacctgtggccatggaggcagcaaccaacaaagatgaactgatcgcctatgaactaacg
agaagggaagcagaatcaaacagaagaccccttcccgagttggttcgtgccaagatacca
ttcagtgcctgcctgcaggccttttctgaaccagaaaatgttgatgatttctggagcagc
gccttgcaagcaaagtctgcgggtgtgaaaacatctcgctttgcctcattccctgaatac
ttggtagtgcagataaagaagttcacttttggtcttgactgggttcccaaaaaatttgat
gtttctgttgatatgccagacctacttgatatcaaccatctccgagccagggggttgcag
ccaggagaggaggaacttccagacatcagcccccccatagtgattcctgatgactctaaa
gatcgcctgatgacccaattgatagacccatcagatattgatgagtcttcggtgatgcag
ctggctgagatgggcttccctctagaagcatgtcggaaggctgtgtattttactggaaat
atgggagccgaggtggccttcaactggatcgttgttcacatggaagagccagattttgct
gaaccgctgaccatgcctggttatggaggagcagcttctgctggggcctctgtttttggt
gctactggattggataaccaacctccggaagaaactgtagctatcattacctccatggga
ttccatcgaaatcaggctattcaggccctgcgagcaacgaatagtaacctggaaagagca
ctggattggatctttagccaccctgagtttgaggaggacagtgactttgtgatcgagatg
gagaataacgccaatgcgaacatcgtttctgaggccaaacctgaaggacctagagtcaag
gatggatctggaatgtatgaattatttgcgttcatcagtcacatgggaacgtctacaatg
agtggccactacgtttgtcacattaaaaaggaaggaagatgggtgatctacaatgaccac
aaagtttgtgcctcagaaaggccccctaaagacctgggctacatgtacttttaccgcagg
ataccaagctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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